BLASTX nr result

ID: Atractylodes21_contig00049249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049249
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...    86   4e-15
ref|XP_002306821.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002302072.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002280186.2| PREDICTED: E3 ubiquitin protein ligase DRIP2...    59   3e-07
ref|XP_002892358.1| zinc finger family protein [Arabidopsis lyra...    59   3e-07

>ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2 [Vitis vinifera]
           gi|297735508|emb|CBI17948.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/97 (48%), Positives = 56/97 (57%)
 Frame = -2

Query: 301 EGKADMWKPLNYLVEVANRSKSSKFTSQGSAVKSASQHTPKNEGHGRKPKVKDQLKRSKF 122
           EGK D+WKPLN LVEVANR+KS KF SQGSAVKS   H P  E   RK KVK+  ++SK 
Sbjct: 208 EGKFDLWKPLNCLVEVANRTKSLKFNSQGSAVKSEPMHVPDGESQVRKTKVKEHGRKSKV 267

Query: 121 QDENGRSDVDVTESAXXXXXXXXXXXKAGPLGESGVA 11
           QDE   +     ES            +A   GE G++
Sbjct: 268 QDEKISTTPVSAESVKPKKLCRVRRRRAAAFGELGIS 304


>ref|XP_002306821.1| predicted protein [Populus trichocarpa] gi|222856270|gb|EEE93817.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/68 (44%), Positives = 42/68 (61%)
 Frame = -2

Query: 301 EGKADMWKPLNYLVEVANRSKSSKFTSQGSAVKSASQHTPKNEGHGRKPKVKDQLKRSKF 122
           +GK+D+W+PLN+LVEVANR+KS K   Q +  K  S+   +NE    K K K+   +SK 
Sbjct: 213 DGKSDLWQPLNFLVEVANRTKSFKSIPQVNDAKLESRPVRENEPQVHKTKFKENKDKSKV 272

Query: 121 QDENGRSD 98
           +DE    D
Sbjct: 273 KDEKNNID 280


>ref|XP_002302072.1| predicted protein [Populus trichocarpa] gi|222843798|gb|EEE81345.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/68 (44%), Positives = 42/68 (61%)
 Frame = -2

Query: 301 EGKADMWKPLNYLVEVANRSKSSKFTSQGSAVKSASQHTPKNEGHGRKPKVKDQLKRSKF 122
           +GK+D+W+PLN+LVEVANR+KS K + Q +  KS S+    NE    + K K    +SK 
Sbjct: 214 DGKSDLWQPLNFLVEVANRTKSFKSSPQLNDAKSESRPVHDNEPRALRTKFKGNKDKSKV 273

Query: 121 QDENGRSD 98
           +DE    D
Sbjct: 274 KDEKNNID 281


>ref|XP_002280186.2| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Vitis vinifera]
          Length = 429

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/68 (50%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = -2

Query: 295 KADMWKPLNYLVEVANRSKSSKFTSQGSAVKSASQHTPKNEGHGRKPKVKDQLKRSKFQD 116
           K DMWKPLN LVE  + +KS+K   QGS  KS   H    E H  K K+K++ K  KFQD
Sbjct: 209 KDDMWKPLNCLVEACSGTKSNKLNLQGSLAKSTPSHVDDKEAHVPKAKLKERGK-LKFQD 267

Query: 115 -ENGRSDV 95
            ENG + V
Sbjct: 268 EENGTTHV 275


>ref|XP_002892358.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338200|gb|EFH68617.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = -2

Query: 283 WKPLNYLVEVANRSKSSKFT-SQGSAVKSASQHTPKNEGHGRKPKVKDQLKRSKFQDENG 107
           WKPLN+LVEVANR+K  K + SQGS  KS   +   N+  G K K KD+ ++ K +DE  
Sbjct: 202 WKPLNFLVEVANRTKPLKSSASQGSGSKSEHANASHNQFQGSKTKTKDKKRKCKREDEKS 261

Query: 106 RSDVDVTES 80
             D   +E+
Sbjct: 262 NGDPTTSET 270


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