BLASTX nr result

ID: Atractylodes21_contig00049193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049193
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    72   4e-11
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    71   8e-11
ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209...    69   4e-10
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    68   7e-10
gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H...    68   9e-10

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/53 (69%), Positives = 43/53 (81%)
 Frame = +1

Query: 7    FVIETDASGFRLGAVLMHHEHLIAYFSQALGTQARSKSIYEKELMAIVSAV*K 165
            FVIE DASG+ LGAVL+   H IAYFS+ LG +AR+KSIYEKELMA+V AV K
Sbjct: 918  FVIEADASGYGLGAVLLQQGHPIAYFSKTLGERARAKSIYEKELMAVVMAVQK 970


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/57 (64%), Positives = 44/57 (77%)
 Frame = +1

Query: 7   FVIETDASGFRLGAVLMHHEHLIAYFSQALGTQARSKSIYEKELMAIVSAV*K*RPY 177
           FVIE +ASG+ LG VL+   H IAYFS+ LG +AR+KSIYEKELMA+V AV K R Y
Sbjct: 754 FVIEANASGYGLGVVLLQQGHPIAYFSKVLGVRARAKSIYEKELMAVVLAVLKWRHY 810


>ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209704 [Cucumis sativus]
          Length = 1503

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/68 (54%), Positives = 48/68 (70%)
 Frame = +1

Query: 7    FVIETDASGFRLGAVLMHHEHLIAYFSQALGTQARSKSIYEKELMAIVSAV*K*RPYEES 186
            F+IETDASG  LGAVL  + H IA+FSQ L  +A++KSIYE+ELMA+V +V K R Y   
Sbjct: 1136 FIIETDASGIALGAVLSQNGHPIAFFSQKLSNRAKTKSIYERELMAVVLSVQKWRHYLLG 1195

Query: 187  RLRDYLTD 210
            R    ++D
Sbjct: 1196 RKFTIISD 1203


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/57 (61%), Positives = 44/57 (77%)
 Frame = +1

Query: 7    FVIETDASGFRLGAVLMHHEHLIAYFSQALGTQARSKSIYEKELMAIVSAV*K*RPY 177
            FV+ETDASG+ +GAVLM     IAY+S+ LGT+A+ KS+YEKELMAI  AV K + Y
Sbjct: 986  FVVETDASGYGMGAVLMQDNRPIAYYSKLLGTRAQLKSVYEKELMAICFAVQKWKYY 1042


>gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 657

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/70 (52%), Positives = 47/70 (67%)
 Frame = +1

Query: 1   KEFVIETDASGFRLGAVLMHHEHLIAYFSQALGTQARSKSIYEKELMAIVSAV*K*RPYE 180
           KEF IE+DASG  LGA+L+ +  LIAYFS+ALG +  +KS YEKELMA+  ++   RPY 
Sbjct: 160 KEFYIESDASGNGLGAILLQNGRLIAYFSKALGDRNLTKSAYEKELMAVALSIQHWRPYL 219

Query: 181 ESRLRDYLTD 210
             R     TD
Sbjct: 220 MGRKFTVCTD 229


Top