BLASTX nr result

ID: Atractylodes21_contig00049098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049098
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526892.1| PREDICTED: translation factor GUF1 homolog, ...    79   4e-13
ref|XP_002300223.1| predicted protein [Populus trichocarpa] gi|3...    79   5e-13
ref|XP_003523197.1| PREDICTED: translation factor GUF1 homolog, ...    78   9e-13
gb|AAM12957.1| GTP-binding protein LepA homolog [Arabidopsis tha...    78   9e-13
ref|XP_004144367.1| PREDICTED: translation factor GUF1 homolog, ...    77   1e-12

>ref|XP_003526892.1| PREDICTED: translation factor GUF1 homolog, chloroplastic-like
           [Glycine max]
          Length = 687

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/78 (47%), Positives = 52/78 (66%)
 Frame = -2

Query: 234 GTGPNCFILEVEEDIGMDCINVIYCSAKEDRVMKKMLNANVQGIPPSLEAARRPVRVVIL 55
           G  P+  I E+EE +G+DC N I CSAKE   + ++LNA V  IPP  + ++RP+R +I 
Sbjct: 224 GAEPDRVIKEIEEIVGLDCSNAILCSAKEGIGIIEILNAIVARIPPPEDTSKRPLRALIF 283

Query: 54  DSYQGTYRGIIAYFCIID 1
           DSY   YRG+I YF ++D
Sbjct: 284 DSYYDPYRGVIVYFRVVD 301


>ref|XP_002300223.1| predicted protein [Populus trichocarpa]
           gi|317411668|sp|B9GHA6.1|GUFP_POPTR RecName:
           Full=Translation factor GUF1 homolog, chloroplastic;
           AltName: Full=Elongation factor 4 homolog; Short=EF-4;
           AltName: Full=GTPase GUF1 homolog; AltName:
           Full=Ribosomal back-translocase; Flags: Precursor
           gi|222847481|gb|EEE85028.1| predicted protein [Populus
           trichocarpa]
          Length = 639

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/78 (47%), Positives = 51/78 (65%)
 Frame = -2

Query: 234 GTGPNCFILEVEEDIGMDCINVIYCSAKEDRVMKKMLNANVQGIPPSLEAARRPVRVVIL 55
           G  P+    E+EE IG+DC N I+CSAKE   + ++LNA V+ +PP  + A  P+R +I 
Sbjct: 176 GAEPDRVCKEIEEVIGLDCSNAIHCSAKEGIGITEILNAIVERVPPPRDTAAMPLRALIF 235

Query: 54  DSYQGTYRGIIAYFCIID 1
           DSY   YRG+I YF +ID
Sbjct: 236 DSYYDPYRGVIVYFRVID 253


>ref|XP_003523197.1| PREDICTED: translation factor GUF1 homolog, chloroplastic-like
           [Glycine max]
          Length = 689

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/78 (46%), Positives = 52/78 (66%)
 Frame = -2

Query: 234 GTGPNCFILEVEEDIGMDCINVIYCSAKEDRVMKKMLNANVQGIPPSLEAARRPVRVVIL 55
           G  P+  I E+EE +G+DC N I CSAKE   + ++LNA V  IPP  + +++P+R +I 
Sbjct: 226 GAEPDRVIKEIEEIVGLDCSNAILCSAKEGIGIIEILNAIVARIPPPEDTSKKPLRTLIF 285

Query: 54  DSYQGTYRGIIAYFCIID 1
           DSY   YRG+I YF ++D
Sbjct: 286 DSYYDPYRGVIVYFRVVD 303


>gb|AAM12957.1| GTP-binding protein LepA homolog [Arabidopsis thaliana]
           gi|22136082|gb|AAM91119.1| GTP-binding protein LepA-like
           protein [Arabidopsis thaliana]
          Length = 681

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/78 (47%), Positives = 51/78 (65%)
 Frame = -2

Query: 234 GTGPNCFILEVEEDIGMDCINVIYCSAKEDRVMKKMLNANVQGIPPSLEAARRPVRVVIL 55
           G  P   + E+EE IG+DC   I+CSAKE   + ++L+A VQ IP  L+ A +P+R +I 
Sbjct: 218 GAEPEKVLREIEEVIGLDCSKAIFCSAKEGIGITEILDAIVQRIPAPLDTAGKPLRAIIF 277

Query: 54  DSYQGTYRGIIAYFCIID 1
           DSY   YRG+I YF +ID
Sbjct: 278 DSYYDPYRGVIVYFRVID 295


>ref|XP_004144367.1| PREDICTED: translation factor GUF1 homolog, chloroplastic-like
           [Cucumis sativus]
          Length = 628

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/78 (47%), Positives = 50/78 (64%)
 Frame = -2

Query: 234 GTGPNCFILEVEEDIGMDCINVIYCSAKEDRVMKKMLNANVQGIPPSLEAARRPVRVVIL 55
           G  P   I E+EE +G+DC N I CSAKE   + ++LNA V+ +PP    A RP+R +I 
Sbjct: 219 GADPLRVIKEIEEIVGLDCSNAIQCSAKEGIGIIEILNAIVERVPPPRNTADRPLRALIF 278

Query: 54  DSYQGTYRGIIAYFCIID 1
           DSY   YRG+I YF ++D
Sbjct: 279 DSYYDPYRGVIVYFRVLD 296


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