BLASTX nr result

ID: Atractylodes21_contig00049025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049025
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]         86   3e-15
emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]    63   2e-08
emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]    63   2e-08
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]    63   2e-08
emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]    63   2e-08

>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/73 (57%), Positives = 57/73 (78%)
 Frame = -2

Query: 225 NQDLVKLDRFDGCHYTRWAEKVKFMLMVLKLFYVMHLELPPIPADPIPEAGKDPDRAAIT 46
           NQ+ VKLDRFDG +YTRWA+KVKFML+VLKL+Y++  +LP IP DP  EAG+ P+     
Sbjct: 2   NQEFVKLDRFDGQNYTRWADKVKFMLVVLKLYYILDPDLPAIPDDPPGEAGELPNE---- 57

Query: 45  EL*KQRMMRRENE 7
           +L +QR++R+E E
Sbjct: 58  DLARQRLIRKEAE 70


>emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
          Length = 1114

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 25/45 (55%), Positives = 36/45 (80%)
 Frame = -2

Query: 231 VTNQDLVKLDRFDGCHYTRWAEKVKFMLMVLKLFYVMHLELPPIP 97
           + NQDLV+LDRFDG ++TRW +KV+F+L  LK+FY++   L P+P
Sbjct: 8   IMNQDLVRLDRFDGSNFTRWQDKVRFLLTALKIFYILDPTLAPLP 52


>emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
          Length = 804

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 25/45 (55%), Positives = 36/45 (80%)
 Frame = -2

Query: 231 VTNQDLVKLDRFDGCHYTRWAEKVKFMLMVLKLFYVMHLELPPIP 97
           + NQDLV+LDRFDG ++TRW +KV+F+L  LK+FY++   L P+P
Sbjct: 8   IMNQDLVRLDRFDGSNFTRWQDKVRFLLTALKIFYILDPTLAPLP 52


>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
          Length = 1236

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 25/45 (55%), Positives = 37/45 (82%)
 Frame = -2

Query: 231 VTNQDLVKLDRFDGCHYTRWAEKVKFMLMVLKLFYVMHLELPPIP 97
           + NQDLV+LDRFDG ++TRW +KV+F+L+ LK+FY++   L P+P
Sbjct: 8   IMNQDLVRLDRFDGSNFTRWQDKVRFLLIALKIFYILDPILAPLP 52


>emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]
          Length = 791

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 25/45 (55%), Positives = 36/45 (80%)
 Frame = -2

Query: 231 VTNQDLVKLDRFDGCHYTRWAEKVKFMLMVLKLFYVMHLELPPIP 97
           + NQDLV+LDRFDG ++TRW +KV+F+L  LK+FY++   L P+P
Sbjct: 8   IMNQDLVRLDRFDGSNFTRWQDKVRFLLTALKIFYILDPTLAPLP 52


Top