BLASTX nr result

ID: Atractylodes21_contig00048990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048990
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    87   1e-15
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    72   4e-11

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/86 (47%), Positives = 62/86 (72%)
 Frame = -3

Query: 297 QTGSMGEFQRHFIEAVAPLEKIPENIPLGQFINGLKEDIKAEVRMLGPMTLEQAMDLAIK 118
           QT S+ E++R F+E  APL+ IPE I +G+FI+GL  ++++E+R+L P  L+QAM+LA+K
Sbjct: 264 QTASVWEYRRKFVETAAPLDGIPEEILMGKFIHGLNPELQSEIRVLNPYNLDQAMELALK 323

Query: 117 VEERNRITFIGPKGGRAYSYSTANTG 40
           +EERNR+      G R+ S+S  N G
Sbjct: 324 LEERNRVNGARRTGPRSGSFSIYNRG 349


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/78 (48%), Positives = 54/78 (69%)
 Frame = -3

Query: 279 EFQRHFIEAVAPLEKIPENIPLGQFINGLKEDIKAEVRMLGPMTLEQAMDLAIKVEERNR 100
           E++R FIE +APLE IPE+I   QF++ LKE+IK EVR++GP +L+ AM+LA++VEE+  
Sbjct: 195 EYRRKFIELLAPLEGIPESIAQAQFVSKLKEEIKNEVRIMGPSSLDHAMELAVQVEEKLN 254

Query: 99  ITFIGPKGGRAYSYSTAN 46
                    +A SYS  N
Sbjct: 255 HRPKKKWESKASSYSAHN 272


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