BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048485
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   138   5e-31
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   135   3e-30
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   134   6e-30
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   134   8e-30
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]   130   1e-28

>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  138 bits (347), Expect = 5e-31
 Identities = 60/124 (48%), Positives = 87/124 (70%)
 Frame = +3

Query: 3    RFEANIPKRFWGECILSAAYIINRLPSKVIKNKTPYELVWNEKSEYEHLRILGCLAYFKN 182
            RF++ +P +FWGECILSAAY+INR PS +++ K+PYE+++    +Y HLR+ G L Y  N
Sbjct: 688  RFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHN 747

Query: 183  NNTRGDKFEQRGKPGVFLGYPQGTKGYKIYDIEDGKMIVSRDVFFMENVFPFKNITEGSC 362
             N +GDKF  R +  VF+GYP G KG++++D+E+ K  VSRDV F E  FP+  +   SC
Sbjct: 748  QNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPYSKM---SC 804

Query: 363  DNDD 374
            + +D
Sbjct: 805  NEED 808


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  135 bits (340), Expect = 3e-30
 Identities = 57/116 (49%), Positives = 83/116 (71%)
 Frame = +3

Query: 3   RFEANIPKRFWGECILSAAYIINRLPSKVIKNKTPYELVWNEKSEYEHLRILGCLAYFKN 182
           RF++ +P +FWGECILSAAY+INR PS +++ K+PYE+++    +Y HLR+ G L Y  N
Sbjct: 464 RFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHN 523

Query: 183 NNTRGDKFEQRGKPGVFLGYPQGTKGYKIYDIEDGKMIVSRDVFFMENVFPFKNIT 350
            N +GDKF  R +  VF+GYP G KG++++D+E+ K  VSRDV F E  FP+  ++
Sbjct: 524 QNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPYSKMS 579


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  134 bits (338), Expect = 6e-30
 Identities = 57/116 (49%), Positives = 82/116 (70%)
 Frame = +3

Query: 3   RFEANIPKRFWGECILSAAYIINRLPSKVIKNKTPYELVWNEKSEYEHLRILGCLAYFKN 182
           RF++ +P +FWGECILSAAY+INR PS +++ K+PYE+++     Y HLR+ G L Y  N
Sbjct: 464 RFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPNYSHLRVFGSLCYAHN 523

Query: 183 NNTRGDKFEQRGKPGVFLGYPQGTKGYKIYDIEDGKMIVSRDVFFMENVFPFKNIT 350
            N +GDKF  R +  VF+GYP G KG++++D+E+ K  VSRDV F E  FP+  ++
Sbjct: 524 QNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPYSKMS 579


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  134 bits (337), Expect = 8e-30
 Identities = 57/113 (50%), Positives = 81/113 (71%)
 Frame = +3

Query: 3   RFEANIPKRFWGECILSAAYIINRLPSKVIKNKTPYELVWNEKSEYEHLRILGCLAYFKN 182
           RF+AN+P +FWGEC+L+AAY+INR PS V+ + TPYE +  ++  ++HLR+ G L Y  N
Sbjct: 564 RFQANLPIQFWGECVLTAAYLINRTPSSVLNDSTPYERLHKKQPRFDHLRVFGSLCYAHN 623

Query: 183 NNTRGDKFEQRGKPGVFLGYPQGTKGYKIYDIEDGKMIVSRDVFFMENVFPFK 341
            N  GDKF +R +  VF+GYP G KG++++D+E  +  VSRDV F E  FPF+
Sbjct: 624 RNRGGDKFAERSRRCVFVGYPHGQKGWRLFDLEQNEFFVSRDVVFSELEFPFR 676


>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
          Length = 1323

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/130 (46%), Positives = 86/130 (66%), Gaps = 4/130 (3%)
 Frame = +3

Query: 3   RFEANIPKRFWGECILSAAYIINRLPSKVIKNKTPYELVWNEKSEYEHLRILGCLAYFKN 182
           +F A +P +FWGEC L+A +IINRLPS ++  KTP+EL++++   Y HLR+ GCLAY  N
Sbjct: 540 KFHAQVPTQFWGECALTAVHIINRLPSPILSFKTPFELLYSKPPSYSHLRVFGCLAYATN 599

Query: 183 NNTRGDKFEQRGKPGVFLGYPQGTKGYKIYDIEDGKMIVSRDVFFMENVFPF----KNIT 350
            +T   KF+ R  P +F+GYP G K YK++D+   K+  SRDV F E++FP+     N T
Sbjct: 600 VHT-SHKFDYRAMPSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIFPYVSLKPNST 658

Query: 351 EGSCDNDDGP 380
             S  ++ GP
Sbjct: 659 LPSLTHNSGP 668