BLASTX nr result

ID: Atractylodes21_contig00047993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047993
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    86   4e-15
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    82   4e-14
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    75   4e-12
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    75   4e-12
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    75   5e-12

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/74 (51%), Positives = 55/74 (74%)
 Frame = -3

Query: 226 VSLNSVAGFTTPKTMKLEGLVGEQRVVVLVDSGASCNFIAMNVVDKVGIVVHPTEGYQIS 47
           VSLNSV G + PKTMKL GL+    VVV++D GA+ NF+++  +DK+GI V  +E + +S
Sbjct: 469 VSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPVTESEEFGVS 528

Query: 46  MGNGKAVEGQGVCR 5
           +G+G+AV G G+CR
Sbjct: 529 LGDGQAVRGTGICR 542


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 35/77 (45%), Positives = 57/77 (74%)
 Frame = -3

Query: 232  IGVSLNSVAGFTTPKTMKLEGLVGEQRVVVLVDSGASCNFIAMNVVDKVGIVVHPTEGYQ 53
            + +SLNSV G TTP TMK++G +G + V++LVDSGA+ NF+++ +V ++ + +  T  Y 
Sbjct: 1043 VELSLNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHNFLSLELVQQLTLPLTTTTSYG 1102

Query: 52   ISMGNGKAVEGQGVCRG 2
            + MG G +V+G+G+CRG
Sbjct: 1103 VMMGTGISVKGKGICRG 1119


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 32/77 (41%), Positives = 53/77 (68%)
 Frame = -3

Query: 232  IGVSLNSVAGFTTPKTMKLEGLVGEQRVVVLVDSGASCNFIAMNVVDKVGIVVHPTEGYQ 53
            + +S+NSV G T PKTMK+ G + ++ V++L+D GA+ NFI+  VV ++ +    T  Y 
Sbjct: 1314 VELSINSVVGLTNPKTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYG 1373

Query: 52   ISMGNGKAVEGQGVCRG 2
            + +G+G AV+G+G+C G
Sbjct: 1374 VILGSGAAVKGKGICEG 1390


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/80 (43%), Positives = 56/80 (70%)
 Frame = -3

Query: 241 GTDIGVSLNSVAGFTTPKTMKLEGLVGEQRVVVLVDSGASCNFIAMNVVDKVGIVVHPTE 62
           G  + +SL+SV G T P T K++G V ++ VVV++D GA+ NFI++ +V+++ I    T 
Sbjct: 351 GPIVELSLSSVVGLTAPGTSKIKGKVEDREVVVMIDCGATHNFISLRLVEEMQIATTETT 410

Query: 61  GYQISMGNGKAVEGQGVCRG 2
            Y + MG+GKAV+G+G+C G
Sbjct: 411 QYGVIMGSGKAVQGKGMCTG 430


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 31/73 (42%), Positives = 53/73 (72%)
 Frame = -3

Query: 226 VSLNSVAGFTTPKTMKLEGLVGEQRVVVLVDSGASCNFIAMNVVDKVGIVVHPTEGYQIS 47
           +SLNSV GF+ PKT+KL G +  + V+V++D GA+ NF++++ V+++ I V   +G+++S
Sbjct: 364 ISLNSVMGFSNPKTLKLRGTIYGEAVIVMIDPGATHNFVSIHTVERLNIPVSHAKGFEVS 423

Query: 46  MGNGKAVEGQGVC 8
           +G G+ V G G C
Sbjct: 424 LGTGQEVRGTGEC 436


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