BLASTX nr result

ID: Atractylodes21_contig00047831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047831
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...   135   3e-30
ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi...   134   8e-30
ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-l...   127   1e-27
ref|XP_002458585.1| hypothetical protein SORBIDRAFT_03g036200 [S...   124   6e-27

>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score =  135 bits (341), Expect = 3e-30
 Identities = 70/101 (69%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
 Frame = -3

Query: 345 DSWSNSRDTHES-QTLSRTNSLGSFISEIDHPRRKAEPAYSFVGMHCIFDQCTAMVTVIK 169
           DSWS+SRD     Q  S   S  S  S+ D P RK EPAYSFVGMHCIFDQC A VTV+K
Sbjct: 114 DSWSSSRDLRSGYQASSHRTSFSSSASDNDPPVRKVEPAYSFVGMHCIFDQCKASVTVLK 173

Query: 168 FGHMSSDILAYGATDGTLTVCTVSEPPSIMK-LSGHSKDVT 49
           FG+ SSD+LAYGA DGTLTVCTVS+PPSI+K L GHSKDVT
Sbjct: 174 FGNKSSDLLAYGAADGTLTVCTVSQPPSIIKELRGHSKDVT 214


>ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547972|gb|EEF49464.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 500

 Score =  134 bits (337), Expect = 8e-30
 Identities = 65/101 (64%), Positives = 81/101 (80%), Gaps = 2/101 (1%)
 Frame = -3

Query: 345 DSWSNSRDTHESQTLSRTNSLGSFISEIDHPRRKA-EPAYSFVGMHCIFDQCTAMVTVIK 169
           +SWS+SR+   +   +   S  S +S+ D PRR+  EPAYSFVGMHCIFDQC + VTV+K
Sbjct: 133 ESWSSSRNLSGNLASTHRTSFSSSVSDNDRPRRRGVEPAYSFVGMHCIFDQCKSAVTVLK 192

Query: 168 FGHMSSDILAYGATDGTLTVCTVSEPPSIMK-LSGHSKDVT 49
           FGHMSS++LAYGA+DG+LTVCTVSEPPS++K L GHSKDVT
Sbjct: 193 FGHMSSNLLAYGASDGSLTVCTVSEPPSVLKQLKGHSKDVT 233


>ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  130 bits (328), Expect = 9e-29
 Identities = 68/102 (66%), Positives = 79/102 (77%), Gaps = 3/102 (2%)
 Frame = -3

Query: 345 DSWSNSRDTHESQTLS-RTNSLGSFISEIDHPRRK-AEPAYSFVGMHCIFDQCTAMVTVI 172
           DSW++SRD   +   S    S  S  S+ D  RR+ AEPAYSFVGMHCIFDQC A VTV+
Sbjct: 138 DSWTSSRDLRSTNLPSTHRTSFSSTASDNDSLRRRGAEPAYSFVGMHCIFDQCKAAVTVL 197

Query: 171 KFGHMSSDILAYGATDGTLTVCTVSEPPSIM-KLSGHSKDVT 49
           KFGHMSSD+LAYGA+DGTLTVC VS+PPS++ KL GHSKDVT
Sbjct: 198 KFGHMSSDLLAYGASDGTLTVCLVSDPPSVIKKLEGHSKDVT 239


>ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 553

 Score =  127 bits (318), Expect = 1e-27
 Identities = 66/102 (64%), Positives = 79/102 (77%), Gaps = 3/102 (2%)
 Frame = -3

Query: 345 DSWSNSRDTHESQTL-SRTNSLGSFISEIDHPR-RKAEPAYSFVGMHCIFDQCTAMVTVI 172
           DS S+ RD   +  + +   S GS +S+ D PR R  E AYSFVGMHCIFDQC A VTV+
Sbjct: 137 DSLSSGRDLQNANPVYNHRTSFGSSVSDSDRPRHRGVEAAYSFVGMHCIFDQCKASVTVL 196

Query: 171 KFGHMSSDILAYGATDGTLTVCTVSEPPSIMK-LSGHSKDVT 49
           KFGHMSSD+LAYGA+DGTLTVC+VSE PS++K L+GHSKDVT
Sbjct: 197 KFGHMSSDLLAYGASDGTLTVCSVSENPSVIKQLNGHSKDVT 238


>ref|XP_002458585.1| hypothetical protein SORBIDRAFT_03g036200 [Sorghum bicolor]
           gi|241930560|gb|EES03705.1| hypothetical protein
           SORBIDRAFT_03g036200 [Sorghum bicolor]
          Length = 324

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
 Frame = -3

Query: 345 DSWSNSRDTHE-SQTLSRTNSLGSFISEIDHPRRKAEPAYSFVGMHCIFDQCTAMVTVIK 169
           DSWS  RD    S  LSRT S+GS  S+ +   R AEPAYSFVGMHCIFD C A VT++K
Sbjct: 120 DSWSYLRDLRSNSGVLSRTLSIGSKHSDTERHVRFAEPAYSFVGMHCIFDNCKASVTILK 179

Query: 168 FGHMSSDILAYGATDGTLTVCTVSEPPSIM-KLSGHSKDVT 49
           FG  SSD+LAYGA DG+LTVC VSEPPS++ K+ GHSK++T
Sbjct: 180 FGRASSDLLAYGAADGSLTVCQVSEPPSVLQKMIGHSKNIT 220


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