BLASTX nr result

ID: Atractylodes21_contig00047809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047809
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519416.1| polyadenylate-binding protein, putative [Ric...    60   1e-07
ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding pr...    59   4e-07
ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding pr...    58   9e-07
emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]    58   9e-07
ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding pr...    57   2e-06

>ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223541279|gb|EEF42830.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 632

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/60 (60%), Positives = 42/60 (70%)
 Frame = -2

Query: 237 VTEDEL*ECFR*CGTITSAKLTINNKGMSKQFGFVNV*SPEEANKAVNTS*FWHFMR*PL 58
           VT++EL E F  CGTITSAKL  ++KG SK FGFV   S EEA+KAVNT   + F R PL
Sbjct: 306 VTDEELREHFSQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAVNTFHGYMFHRKPL 365


>ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 636

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = -2

Query: 237 VTEDEL*ECFR*CGTITSAKLTINNKGMSKQFGFVNV*SPEEANKAVNT 91
           V+++EL + F  CGTITSAK+  ++KG+SK FGFV   +PEEANKAVNT
Sbjct: 305 VSDEELRDHFSACGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNT 353


>ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
           vinifera] gi|297740018|emb|CBI30200.3| unnamed protein
           product [Vitis vinifera]
          Length = 634

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/60 (55%), Positives = 41/60 (68%)
 Frame = -2

Query: 237 VTEDEL*ECFR*CGTITSAKLTINNKGMSKQFGFVNV*SPEEANKAVNTS*FWHFMR*PL 58
           V +D+L E F  CG ITSAKL  + KG+SK FGFV   +P+EA+KAVNT   + F R PL
Sbjct: 305 VNDDDLREHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRKPL 364


>emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
          Length = 544

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/60 (55%), Positives = 41/60 (68%)
 Frame = -2

Query: 237 VTEDEL*ECFR*CGTITSAKLTINNKGMSKQFGFVNV*SPEEANKAVNTS*FWHFMR*PL 58
           V +D+L E F  CG ITSAKL  + KG+SK FGFV   +P+EA+KAVNT   + F R PL
Sbjct: 325 VNDDDLREHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRKPL 384


>ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 632

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 38/49 (77%)
 Frame = -2

Query: 237 VTEDEL*ECFR*CGTITSAKLTINNKGMSKQFGFVNV*SPEEANKAVNT 91
           V+++EL + F  CG ITSAK+  ++KG+SK FGFV   +PEEANKAVNT
Sbjct: 305 VSDEELRDHFSACGIITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNT 353


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