BLASTX nr result

ID: Atractylodes21_contig00047780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047780
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15971.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246...    83   2e-14
ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containin...    76   2e-12
ref|XP_002313385.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containin...    73   2e-11

>emb|CBI15971.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 22/100 (22%)
 Frame = +3

Query: 3   RGECTRGAGCRFSHNEQRAANTGWGPQDAKNSRWGDDKFERSERGPGPSNRVP------- 161
           RGEC RGAGC+FSH+EQRA+NTGWG +D K+SRWG DKF+ S +  G  N +P       
Sbjct: 141 RGECNRGAGCKFSHDEQRASNTGWGSED-KSSRWGHDKFQGSTKSDGRPNSIPTNRVHEP 199

Query: 162 --------GQERTRMR-------GKDSHLKQTERNARDED 236
                   G +  R         G++SH +++E + RD+D
Sbjct: 200 TVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRDQD 239


>ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera]
          Length = 429

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 22/100 (22%)
 Frame = +3

Query: 3   RGECTRGAGCRFSHNEQRAANTGWGPQDAKNSRWGDDKFERSERGPGPSNRVP------- 161
           RGEC RGAGC+FSH+EQRA+NTGWG +D K+SRWG DKF+ S +  G  N +P       
Sbjct: 141 RGECNRGAGCKFSHDEQRASNTGWGSED-KSSRWGHDKFQGSTKSDGRPNSIPTNRVHEP 199

Query: 162 --------GQERTRMR-------GKDSHLKQTERNARDED 236
                   G +  R         G++SH +++E + RD+D
Sbjct: 200 TVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRDQD 239


>ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
           [Glycine max]
          Length = 235

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
 Frame = +3

Query: 3   RGECTRGAGCRFSHNEQRAANTGWGPQDAKNSRWGDDKFE--RSER--GPGPSNRVP--- 161
           RGECTRGA C+FSH+EQRAANTGWG ++ K  +WG DKFE  + ER  G   SN +P   
Sbjct: 141 RGECTRGASCKFSHDEQRAANTGWGREEDK-PKWGHDKFEGPKKERRSGNNQSNHIPETR 199

Query: 162 -GQERTRMRGKDSHLKQTERNARDEDT 239
               RTR R  D+ L    + +   +T
Sbjct: 200 DRDSRTRARNFDAELDNQPKKSDRRET 226


>ref|XP_002313385.1| predicted protein [Populus trichocarpa] gi|222849793|gb|EEE87340.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/73 (56%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   RGECTRGAGCRFSHNEQRAANTGWGPQDAKNSRWGDDKFERSERGPGPSNRVPGQERTRM 182
           RGEC RGAGCRFSH+EQRAANTGWG QD K+SRWG + F+    GP  S     +ER+  
Sbjct: 141 RGECNRGAGCRFSHDEQRAANTGWGAQD-KSSRWGHEMFD----GPKKS-----EERSSY 190

Query: 183 R-GKDSHLKQTER 218
               +SH KQ +R
Sbjct: 191 NMPSESHPKQNDR 203


>ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
           [Cucumis sativus]
          Length = 395

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/78 (44%), Positives = 51/78 (65%)
 Frame = +3

Query: 3   RGECTRGAGCRFSHNEQRAANTGWGPQDAKNSRWGDDKFERSERGPGPSNRVPGQERTRM 182
           RGECTRGAGC+FSH+EQRAA+TGWG  +  +S+WG DKF+ S +         G++ +  
Sbjct: 141 RGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD-SRKNHDKELHAKGRKTSDN 199

Query: 183 RGKDSHLKQTERNARDED 236
            G+  H ++T  + R E+
Sbjct: 200 LGR--HPRETSGSLRQEN 215


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