BLASTX nr result
ID: Atractylodes21_contig00047780
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00047780 (239 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI15971.3| unnamed protein product [Vitis vinifera] 83 2e-14 ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246... 83 2e-14 ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containin... 76 2e-12 ref|XP_002313385.1| predicted protein [Populus trichocarpa] gi|2... 75 7e-12 ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containin... 73 2e-11 >emb|CBI15971.3| unnamed protein product [Vitis vinifera] Length = 375 Score = 83.2 bits (204), Expect = 2e-14 Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 22/100 (22%) Frame = +3 Query: 3 RGECTRGAGCRFSHNEQRAANTGWGPQDAKNSRWGDDKFERSERGPGPSNRVP------- 161 RGEC RGAGC+FSH+EQRA+NTGWG +D K+SRWG DKF+ S + G N +P Sbjct: 141 RGECNRGAGCKFSHDEQRASNTGWGSED-KSSRWGHDKFQGSTKSDGRPNSIPTNRVHEP 199 Query: 162 --------GQERTRMR-------GKDSHLKQTERNARDED 236 G + R G++SH +++E + RD+D Sbjct: 200 TVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRDQD 239 >ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera] Length = 429 Score = 83.2 bits (204), Expect = 2e-14 Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 22/100 (22%) Frame = +3 Query: 3 RGECTRGAGCRFSHNEQRAANTGWGPQDAKNSRWGDDKFERSERGPGPSNRVP------- 161 RGEC RGAGC+FSH+EQRA+NTGWG +D K+SRWG DKF+ S + G N +P Sbjct: 141 RGECNRGAGCKFSHDEQRASNTGWGSED-KSSRWGHDKFQGSTKSDGRPNSIPTNRVHEP 199 Query: 162 --------GQERTRMR-------GKDSHLKQTERNARDED 236 G + R G++SH +++E + RD+D Sbjct: 200 TVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRDQD 239 >ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like [Glycine max] Length = 235 Score = 76.3 bits (186), Expect = 2e-12 Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 8/87 (9%) Frame = +3 Query: 3 RGECTRGAGCRFSHNEQRAANTGWGPQDAKNSRWGDDKFE--RSER--GPGPSNRVP--- 161 RGECTRGA C+FSH+EQRAANTGWG ++ K +WG DKFE + ER G SN +P Sbjct: 141 RGECTRGASCKFSHDEQRAANTGWGREEDK-PKWGHDKFEGPKKERRSGNNQSNHIPETR 199 Query: 162 -GQERTRMRGKDSHLKQTERNARDEDT 239 RTR R D+ L + + +T Sbjct: 200 DRDSRTRARNFDAELDNQPKKSDRRET 226 >ref|XP_002313385.1| predicted protein [Populus trichocarpa] gi|222849793|gb|EEE87340.1| predicted protein [Populus trichocarpa] Length = 243 Score = 74.7 bits (182), Expect = 7e-12 Identities = 41/73 (56%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Frame = +3 Query: 3 RGECTRGAGCRFSHNEQRAANTGWGPQDAKNSRWGDDKFERSERGPGPSNRVPGQERTRM 182 RGEC RGAGCRFSH+EQRAANTGWG QD K+SRWG + F+ GP S +ER+ Sbjct: 141 RGECNRGAGCRFSHDEQRAANTGWGAQD-KSSRWGHEMFD----GPKKS-----EERSSY 190 Query: 183 R-GKDSHLKQTER 218 +SH KQ +R Sbjct: 191 NMPSESHPKQNDR 203 >ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like [Cucumis sativus] Length = 395 Score = 73.2 bits (178), Expect = 2e-11 Identities = 35/78 (44%), Positives = 51/78 (65%) Frame = +3 Query: 3 RGECTRGAGCRFSHNEQRAANTGWGPQDAKNSRWGDDKFERSERGPGPSNRVPGQERTRM 182 RGECTRGAGC+FSH+EQRAA+TGWG + +S+WG DKF+ S + G++ + Sbjct: 141 RGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD-SRKNHDKELHAKGRKTSDN 199 Query: 183 RGKDSHLKQTERNARDED 236 G+ H ++T + R E+ Sbjct: 200 LGR--HPRETSGSLRQEN 215