BLASTX nr result

ID: Atractylodes21_contig00047728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047728
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    62   4e-08
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop...    59   5e-07
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...    58   9e-07
ref|XP_004163499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    57   2e-06
ref|XP_004147195.1| PREDICTED: uncharacterized protein LOC101216...    57   2e-06

>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
            [Cucumis sativus]
          Length = 1830

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/59 (50%), Positives = 38/59 (64%)
 Frame = -3

Query: 203  HERTKHIEAAYHFIRDKINDKTIKLLPVRTQFQPADMFTKALPQXXXXXXXXXMALQDI 27
            HERTKHIE   HF+RDKI +  +K+LP+ T  Q ADMFTKALP          + ++DI
Sbjct: 1768 HERTKHIEIDCHFVRDKIVEGFLKVLPINTSLQLADMFTKALPSSTLNRHISKLGMKDI 1826


>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1137

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/43 (55%), Positives = 33/43 (76%)
 Frame = -3

Query: 203  HERTKHIEAAYHFIRDKINDKTIKLLPVRTQFQPADMFTKALP 75
            HERTKHI+  YHFIRD +N+  +++L + T+  PAD+FTK LP
Sbjct: 1079 HERTKHIDVKYHFIRDLVNNGEVQVLKIDTEDNPADIFTKVLP 1121


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/43 (55%), Positives = 33/43 (76%)
 Frame = -3

Query: 203  HERTKHIEAAYHFIRDKINDKTIKLLPVRTQFQPADMFTKALP 75
            HERTKHI+  YHFIR+KI D  I+++ + T + PAD+FTK +P
Sbjct: 1284 HERTKHIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTVP 1326


>ref|XP_004163499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229082 [Cucumis sativus]
          Length = 802

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = -3

Query: 203 HERTKHIEAAYHFIRDKINDKTIKLLPVRTQFQPADMFTKAL 78
           HERTKHIE   HF+RD++ D++IKLLP+R+  Q AD  TK L
Sbjct: 308 HERTKHIELDCHFVRDRVTDESIKLLPIRSTHQLADALTKPL 349


>ref|XP_004147195.1| PREDICTED: uncharacterized protein LOC101216505 [Cucumis sativus]
          Length = 907

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = -3

Query: 203 HERTKHIEAAYHFIRDKINDKTIKLLPVRTQFQPADMFTKAL 78
           HERTKHIE   HF+RD++ D++IKLLP+R+  Q AD  TK L
Sbjct: 677 HERTKHIELDCHFVRDRVTDESIKLLPIRSTHQLADALTKPL 718


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