BLASTX nr result

ID: Atractylodes21_contig00047694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047694
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein A...    40   4e-08
ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|2...    36   2e-07
ref|XP_003555202.1| PREDICTED: uncharacterized protein LOC100802...    32   4e-06

>ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 549

 Score = 39.7 bits (91), Expect(4) = 4e-08
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
 Frame = +3

Query: 72  SIFFEKWSLHNIMALPSLLKCFELMSGLKINMLKSK---LYVSEEETLDMSSILNFGV 236
           +IF  + +L N+  + ++L+ FE+ SGLKIN  KS      V E+ T   SS LN G+
Sbjct: 93  TIFLGEATLANVRTIKAILRAFEMSSGLKINFAKSSCGAFGVPEQWTYGASSYLNCGL 150



 Score = 30.8 bits (68), Expect(4) = 4e-08
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 235 FTYLGVPIGLNMNKANYWKEVI 300
           FTYLG+PIG N  +   W+ +I
Sbjct: 155 FTYLGIPIGANPRRCQMWEPLI 176



 Score = 25.8 bits (55), Expect(4) = 4e-08
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 305 GRLTLIKSVLGSLPFYF 355
           GR+ LI SVL S+P YF
Sbjct: 195 GRVILINSVLTSIPIYF 211



 Score = 23.9 bits (50), Expect(4) = 4e-08
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 2   VEQGIFKGVHVGCDKVGVTHLQF 70
           +E G +KG  VG  KV ++ LQ+
Sbjct: 67  IEGGFYKGFLVGLKKVEISLLQY 89


>ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|222840624|gb|EEE78171.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score = 35.8 bits (81), Expect(3) = 2e-07
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +3

Query: 72  SIFFEKWSLHNIMALPSLLKCFELMSGLKINMLKSKL 182
           ++ F   SL ++  +  +L CFEL+SGLK+N  KS +
Sbjct: 32  TLIFSTASLSSLQNIKRILLCFELLSGLKVNFYKSSI 68



 Score = 35.8 bits (81), Expect(3) = 2e-07
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +1

Query: 229 LVFTYLGVPIGLNMNKANYWKEVI 300
           L  TYLG+PIG NMN+ + WK +I
Sbjct: 92  LPITYLGLPIGANMNRISMWKPII 115



 Score = 27.3 bits (59), Expect(3) = 2e-07
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 305 GRLTLIKSVLGSLPFYF 355
           GRL L+KSVL +LP Y+
Sbjct: 134 GRLCLLKSVLSNLPIYY 150


>ref|XP_003555202.1| PREDICTED: uncharacterized protein LOC100802580 [Glycine max]
          Length = 1284

 Score = 32.3 bits (72), Expect(4) = 4e-06
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +2

Query: 305  GRLTLIKSVLGSLPFYFF 358
            GR+TLIKSVL S+P YFF
Sbjct: 1151 GRVTLIKSVLTSIPLYFF 1168



 Score = 32.0 bits (71), Expect(4) = 4e-06
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +3

Query: 72   SIFFEKWSLHNIMALPSLLKCFELMSGLKINMLKS 176
            +IFF +    N+MA+  +L+ F L SGLKIN   S
Sbjct: 1049 TIFFGEAITENLMAVKIILRSFVLASGLKINFANS 1083



 Score = 26.9 bits (58), Expect(4) = 4e-06
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 226  TLVFTYLGVPIGLNMNKANYWKEVI 300
            T    YLG+P+G N  +   W  +I
Sbjct: 1108 TFPLVYLGIPLGANPRRGRMWDPII 1132



 Score = 21.6 bits (44), Expect(4) = 4e-06
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 5    EQGIFKGVHVGCDKVGVTHLQF 70
            E+ I+K   VG + V ++ LQ+
Sbjct: 1024 EENIYKSFKVGTNNVNISILQY 1045


Top