BLASTX nr result

ID: Atractylodes21_contig00047585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047585
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98602.2| retrotransposon protein, putative, unclassified [...    58   2e-06
gb|ABA93987.1| retrotransposon protein, putative, unclassified [...    57   3e-06
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    57   4e-06
gb|ABA95357.2| retrotransposon protein, putative, unclassified [...    57   4e-06
ref|NP_001052369.2| Os04g0283700 [Oryza sativa Japonica Group] g...    56   5e-06

>gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2202

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
 Frame = -3

Query: 632  VFLKLQPYKTKVFTDQTESIRNLQFVFTGLFPI---VG*VAYKLQLPPTACIHSVFHVSQ 462
            VFLKLQPY  +  +  T + R L F F G F +   VG VAYKL LP T+ IH V HVSQ
Sbjct: 1296 VFLKLQPYVQQ--SVMTRANRKLSFKFYGPFQVLQRVGSVAYKLDLPSTSMIHPVVHVSQ 1353

Query: 461  LRRPIGP 441
            L++ + P
Sbjct: 1354 LKKALAP 1360


>gb|ABA93987.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1485

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
 Frame = -3

Query: 632  VFLKLQPYKTKVFTDQTESIRNLQFVFTGLFPI---VG*VAYKLQLPPTACIHSVFHVSQ 462
            VFLKLQPY  +  +  T + R L F F G F +   VG VAYKL LP T+ IH V HVSQ
Sbjct: 1297 VFLKLQPYVQQ--SVMTRANRKLSFKFYGPFQVLQRVGSVAYKLDLPSTSMIHPVVHVSQ 1354

Query: 461  LRRPIGP 441
            L++   P
Sbjct: 1355 LKKAFAP 1361


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
 Frame = -3

Query: 635  VVFLKLQPYKTKVFTDQTESIRNLQFVFTGLFPI---VG*VAYKLQLPPTACIHSVFHVS 465
            +VFLK++PY+      +      L   F G F +   +G VAYKLQLP ++CIH VFHVS
Sbjct: 2304 MVFLKIRPYRQSSLRKKKNE--KLSPKFFGPFEVTERIGLVAYKLQLPESSCIHPVFHVS 2361

Query: 464  QLRRPIG 444
            QLR+ +G
Sbjct: 2362 QLRKMVG 2368


>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2811

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
 Frame = -3

Query: 632  VFLKLQPYKTKVFTDQTESIRNLQFVFTGLFPI---VG*VAYKLQLPPTACIHSVFHVSQ 462
            VF+KLQPY  + F   T S R L F + G F +   +G VAY+LQLP  + IH V HVSQ
Sbjct: 2629 VFMKLQPYIQQSF--MTRSNRKLSFKYYGPFQVLQRIGSVAYRLQLPAHSLIHPVVHVSQ 2686

Query: 461  LRRPIGP 441
            L++ + P
Sbjct: 2687 LKKALAP 2693


>ref|NP_001052369.2| Os04g0283700 [Oryza sativa Japonica Group]
           gi|255675280|dbj|BAF14283.2| Os04g0283700, partial
           [Oryza sativa Japonica Group]
          Length = 258

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
 Frame = -3

Query: 632 VFLKLQPY-KTKVFTDQTESIRNLQFVFTGLFPI---VG*VAYKLQLPPTACIHSVFHVS 465
           V+LKLQPY +T V      +   L F + G F I   +G VAYKLQLPPT+ IH VFHVS
Sbjct: 35  VYLKLQPYVQTSV---AVRANHKLAFKYFGPFQITAQIGTVAYKLQLPPTSSIHPVFHVS 91

Query: 464 QLRRPIG 444
           QL+   G
Sbjct: 92  QLKSATG 98