BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047188
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]          55   1e-07
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]          54   4e-07
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      54   5e-07
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    53   6e-07
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]      53   8e-07

>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score = 55.5 bits (132), Expect(2) = 1e-07
 Identities = 28/53 (52%), Positives = 34/53 (64%)
 Frame = +1

Query: 130 RGTSQH*NPIYKARLVAIGYSQIPRVDHTDI*SSIVKHGLIHALLEMVASSDY 288
           +G S     +YKARLVA GYSQIP +D  D+ S +VKH  I  LL +VA  DY
Sbjct: 652 KGISPSDEAMYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDY 704



 Score = 25.0 bits (53), Expect(2) = 1e-07
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 6   DSHMWMIAMHGEIESLLK 59
           D + W+ AMH E+ESL K
Sbjct: 609 DCNRWITAMHDEMESLEK 626


>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
          Length = 621

 Score = 53.9 bits (128), Expect(2) = 4e-07
 Identities = 26/44 (59%), Positives = 31/44 (70%)
 Frame = +1

Query: 157 IYKARLVAIGYSQIPRVDHTDI*SSIVKHGLIHALLEMVASSDY 288
           +YKARLVA GYSQIP +D  D+ S +VKH  I  LL +VA  DY
Sbjct: 265 MYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDY 308



 Score = 25.0 bits (53), Expect(2) = 4e-07
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 6   DSHMWMIAMHGEIESLLK 59
           D + W+ AMH E+ESL K
Sbjct: 213 DCNRWITAMHDEMESLEK 230


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 53.5 bits (127), Expect(2) = 5e-07
 Identities = 26/43 (60%), Positives = 30/43 (69%)
 Frame = +1

Query: 160 YKARLVAIGYSQIPRVDHTDI*SSIVKHGLIHALLEMVASSDY 288
           YKARLVA GYSQIP +D  D+ S +VKH  I  LL +VA  DY
Sbjct: 789 YKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDY 831



 Score = 25.0 bits (53), Expect(2) = 5e-07
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 6   DSHMWMIAMHGEIESLLK 59
           D + W+ AMH E+ESL K
Sbjct: 736 DCNRWITAMHDEMESLEK 753


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score = 53.1 bits (126), Expect(2) = 6e-07
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = +1

Query: 160  YKARLVAIGYSQIPRVDHTDI*SSIVKHGLIHALLEMVASSDY 288
            YKARL+A GYSQIP +D  D+ S +VKH  I  LL +VA  DY
Sbjct: 1087 YKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDY 1129



 Score = 25.0 bits (53), Expect(2) = 6e-07
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 6    DSHMWMIAMHGEIESLLK 59
            D + W+ AMH E+ESL K
Sbjct: 1034 DCNRWITAMHDEMESLEK 1051


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score = 52.8 bits (125), Expect(2) = 8e-07
 Identities = 26/43 (60%), Positives = 30/43 (69%)
 Frame = +1

Query: 160 YKARLVAIGYSQIPRVDHTDI*SSIVKHGLIHALLEMVASSDY 288
           YKARLVA GYSQIP +D  D+ S +VKH  I  LL +VA  DY
Sbjct: 852 YKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLGIVAMHDY 894



 Score = 25.0 bits (53), Expect(2) = 8e-07
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 6   DSHMWMIAMHGEIESLLK 59
           D + W+ AMH E+ESL K
Sbjct: 799 DCNRWITAMHDEMESLEK 816