BLASTX nr result

ID: Atractylodes21_contig00047176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047176
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311523.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_002534017.1| conserved hypothetical protein [Ricinus comm...   145   4e-33
ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220...   141   6e-32
ref|NP_173737.1| uncharacterized protein [Arabidopsis thaliana] ...   140   1e-31
ref|NP_001185071.1| uncharacterized protein [Arabidopsis thalian...   140   1e-31

>ref|XP_002311523.1| predicted protein [Populus trichocarpa] gi|222851343|gb|EEE88890.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/98 (72%), Positives = 80/98 (81%)
 Frame = -2

Query: 296 SAASRAFQFHPARPAVIDLFNLYLGRNGRHKSADVIREPPNKTQKRVTALNRDLPPPDGQ 117
           SA+SR  QFHPAR A+IDLFNLYLGR+ R K  D  RE PNKTQKRV ALNR+LPPP+ Q
Sbjct: 16  SASSRGHQFHPARAAIIDLFNLYLGRSSRQKPDDSARELPNKTQKRVLALNRELPPPNEQ 75

Query: 116 FLSDFEQLQNQFPDREQLRTVVESVLVSLVIQCSGHAP 3
           FL DFEQL  QFPD+EQLR V ESVL++LV+QCS HAP
Sbjct: 76  FLLDFEQLHTQFPDQEQLRAVTESVLITLVVQCSNHAP 113


>ref|XP_002534017.1| conserved hypothetical protein [Ricinus communis]
           gi|223525976|gb|EEF28365.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1613

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/98 (71%), Positives = 82/98 (83%)
 Frame = -2

Query: 296 SAASRAFQFHPARPAVIDLFNLYLGRNGRHKSADVIREPPNKTQKRVTALNRDLPPPDGQ 117
           +AASR +QF PAR A+IDLFNLYLGR+ R K  D  REPPNKTQKRV ALNR+LPP + Q
Sbjct: 12  TAASRGYQFQPARAAIIDLFNLYLGRSSRQKHDDSTREPPNKTQKRVLALNRELPPRNEQ 71

Query: 116 FLSDFEQLQNQFPDREQLRTVVESVLVSLVIQCSGHAP 3
           FL +FEQLQ+QFPD++QLR+V ESVL+SLVIQC  HAP
Sbjct: 72  FLINFEQLQSQFPDQDQLRSVTESVLISLVIQCCNHAP 109


>ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220785 [Cucumis sativus]
          Length = 2047

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/109 (63%), Positives = 83/109 (76%), Gaps = 5/109 (4%)
 Frame = -2

Query: 314 DQSHHRSA-----ASRAFQFHPARPAVIDLFNLYLGRNGRHKSADVIREPPNKTQKRVTA 150
           DQS   S+      SRA+QFHPAR A+++LF+LYLGR+ R K  D  REPPNK QKRV A
Sbjct: 2   DQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVLA 61

Query: 149 LNRDLPPPDGQFLSDFEQLQNQFPDREQLRTVVESVLVSLVIQCSGHAP 3
           +NR+LPP + QFL DFEQ+QNQF D +QLR V ESVL+SLV+QCSGH P
Sbjct: 62  INRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVP 110


>ref|NP_173737.1| uncharacterized protein [Arabidopsis thaliana]
           gi|395406782|sp|F4I4P3.1|MED23_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           23 gi|332192238|gb|AEE30359.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 1615

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/108 (65%), Positives = 83/108 (76%), Gaps = 4/108 (3%)
 Frame = -2

Query: 314 DQSHHRSAA----SRAFQFHPARPAVIDLFNLYLGRNGRHKSADVIREPPNKTQKRVTAL 147
           DQS    AA    SR++QFHPAR A+IDLFNLYLGR  R K  + +R+PPNK+QKRV A 
Sbjct: 2   DQSQRTVAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPNKSQKRVHAP 61

Query: 146 NRDLPPPDGQFLSDFEQLQNQFPDREQLRTVVESVLVSLVIQCSGHAP 3
           NRDLPP + QFL DFE LQ+QF D EQLRT+ ESVL+SLV+QCS HAP
Sbjct: 62  NRDLPPRNEQFLLDFELLQSQFNDPEQLRTITESVLISLVVQCSNHAP 109


>ref|NP_001185071.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332192239|gb|AEE30360.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 1592

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/108 (65%), Positives = 83/108 (76%), Gaps = 4/108 (3%)
 Frame = -2

Query: 314 DQSHHRSAA----SRAFQFHPARPAVIDLFNLYLGRNGRHKSADVIREPPNKTQKRVTAL 147
           DQS    AA    SR++QFHPAR A+IDLFNLYLGR  R K  + +R+PPNK+QKRV A 
Sbjct: 2   DQSQRTVAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPNKSQKRVHAP 61

Query: 146 NRDLPPPDGQFLSDFEQLQNQFPDREQLRTVVESVLVSLVIQCSGHAP 3
           NRDLPP + QFL DFE LQ+QF D EQLRT+ ESVL+SLV+QCS HAP
Sbjct: 62  NRDLPPRNEQFLLDFELLQSQFNDPEQLRTITESVLISLVVQCSNHAP 109


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