BLASTX nr result

ID: Atractylodes21_contig00047124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047124
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containi...    76   2e-12
emb|CBI19956.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
emb|CBI39775.3| unnamed protein product [Vitis vinifera]               66   3e-09

>ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
           [Vitis vinifera]
          Length = 575

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
 Frame = +2

Query: 2   NDMVWVALLGACRVHSSIDMAHQVLEKVQ--DQEFGDG--SFSVLMSNMYAASERWEKAE 169
           ND+VW ALLGACRVH  ++MA +V+E++   D     G  S  VL+SN+YAAS+RWEKAE
Sbjct: 488 NDVVWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAE 547

Query: 170 SARIVVSRKRGPKTVGHSSI 229
             R+ ++ K   KT G SSI
Sbjct: 548 KMRMEMANKGFQKTSGCSSI 567


>emb|CBI19956.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
 Frame = +2

Query: 2   NDMVWVALLGACRVHSSIDMAHQVLEKVQ--DQEFGDG--SFSVLMSNMYAASERWEKAE 169
           ND+VW ALLGACRVH  ++MA +V+E++   D     G  S  VL+SN+YAAS+RWEKAE
Sbjct: 359 NDVVWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAE 418

Query: 170 SARIVVSRKRGPKTVGHSSI 229
             R+ ++ K   KT G SSI
Sbjct: 419 KMRMEMANKGFQKTSGCSSI 438


>ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g21470-like [Glycine max]
          Length = 535

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = +2

Query: 2   NDMVWVALLGACRVHSSIDMAHQVLEKVQDQEF-GDGSFSVLMSNMYAASERWEKAESAR 178
           ND V  A+LGACR+HS ++MA QV++ + ++   G  S +VL+SN+YAASE+WEKAE  +
Sbjct: 440 NDTVLGAMLGACRIHSDMNMAEQVMKLICEEPVTGASSHNVLLSNIYAASEKWEKAERMK 499

Query: 179 IVVSRKRGPKTVGHSSI 229
            +       +  G SSI
Sbjct: 500 RITVDGGSQRIPGCSSI 516


>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/79 (39%), Positives = 52/79 (65%)
 Frame = +2

Query: 2   NDMVWVALLGACRVHSSIDMAHQVLEKVQDQEFGDGSFSVLMSNMYAASERWEKAESARI 181
           N +VW ALLG C+VH +ID+A + ++ + + +  +  + V++SN+YA +ERWE A   R 
Sbjct: 310 NGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARVRK 369

Query: 182 VVSRKRGPKTVGHSSITLD 238
           ++  +   KT G SSIT++
Sbjct: 370 LMKDRGVKKTSGWSSITVN 388


>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/79 (39%), Positives = 51/79 (64%)
 Frame = +2

Query: 2   NDMVWVALLGACRVHSSIDMAHQVLEKVQDQEFGDGSFSVLMSNMYAASERWEKAESARI 181
           N +VW ALLGACRVH +++MA + ++ + + +  +  + V++SN+YA + RWE     R 
Sbjct: 395 NGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRK 454

Query: 182 VVSRKRGPKTVGHSSITLD 238
            +  ++  KT G SSIT+D
Sbjct: 455 FMKDRQVKKTPGWSSITVD 473


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