BLASTX nr result

ID: Atractylodes21_contig00047109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047109
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...    75   7e-12
ref|XP_002306821.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
emb|CBI35207.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|XP_002264002.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...    65   7e-09
emb|CAN82106.1| hypothetical protein VITISV_006024 [Vitis vinifera]    65   7e-09

>ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2 [Vitis vinifera]
           gi|297735508|emb|CBI17948.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
 Frame = -2

Query: 277 STPRVSTQTTMTGKRSKVTSRXXXXXXXXXXXXXXXXEDE--SMEDHQDSSSSREISNKF 104
           STPRVSTQTTMTG+R+K  +R                + E  S+ +   SSSS E  NKF
Sbjct: 118 STPRVSTQTTMTGRRTKSVARKATALRGSGFSIEKLIKKEEDSVGERPASSSSPETLNKF 177

Query: 103 TQNLRQNSSTPEPSSDRSHDKETKNGAGPREGK 5
           TQN+RQNS + EPS   + +KET+NGA   EGK
Sbjct: 178 TQNIRQNSPSAEPSIHSTPNKETENGAESWEGK 210


>ref|XP_002306821.1| predicted protein [Populus trichocarpa] gi|222856270|gb|EEE93817.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
 Frame = -2

Query: 277 STPRVSTQTTMTGKRSKVTSRXXXXXXXXXXXXXXXXEDES--MEDHQDSSSSREISNKF 104
           STP+VSTQTT TG+R+K   R                + E    ED  +SSSS E   KF
Sbjct: 124 STPKVSTQTTTTGRRTKPFPRKAAALRGSGFSIEKPIKKEHDRAEDSPESSSSPETPKKF 183

Query: 103 TQNLRQNSSTPEPSSDRSHDKETKNGAGPREGKA 2
            QN RQNSS+ EPS   + D E +NGA PR+GK+
Sbjct: 184 NQNTRQNSSSAEPSQP-APDDEAENGAEPRDGKS 216


>emb|CBI35207.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
 Frame = -2

Query: 277 STPRVSTQTTMTGKRSKVTSRXXXXXXXXXXXXXXXXEDE--SMEDHQDSSSSREISNKF 104
           STPRVS QT +TG+R+K  +R                + E  S+ED  +SSSS E  NK 
Sbjct: 118 STPRVSMQTGLTGRRTKAVARKSTALRGSSFSIVEPIKKEEDSVEDCPESSSSPESRNKV 177

Query: 103 TQNLRQNSSTPEPSSDRSHDKETKNGAGPREGK 5
            Q  +QNSS  E S D+  +K+T+N A P +GK
Sbjct: 178 AQTKKQNSSISEASKDQKPNKDTENDADPWDGK 210


>ref|XP_002264002.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Vitis vinifera]
          Length = 449

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
 Frame = -2

Query: 277 STPRVSTQTTMTGKRSKVTSRXXXXXXXXXXXXXXXXEDE--SMEDHQDSSSSREISNKF 104
           STPRVS QT +TG+R+K  +R                + E  S+ED  +SSSS E  NK 
Sbjct: 118 STPRVSMQTGLTGRRTKAVARKSTALRGSSFSIVEPIKKEEDSVEDCPESSSSPESRNKV 177

Query: 103 TQNLRQNSSTPEPSSDRSHDKETKNGAGPREGK 5
            Q  +QNSS  E S D+  +K+T+N A P +GK
Sbjct: 178 AQTKKQNSSISEASKDQKPNKDTENDADPWDGK 210


>emb|CAN82106.1| hypothetical protein VITISV_006024 [Vitis vinifera]
          Length = 662

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
 Frame = -2

Query: 277 STPRVSTQTTMTGKRSKVTSRXXXXXXXXXXXXXXXXEDE--SMEDHQDSSSSREISNKF 104
           STPRVS QT +TG+R+K  +R                + E  S+ED  +SSSS E  NK 
Sbjct: 118 STPRVSMQTGLTGRRTKAVARKSTALRGSSFSIVEPIKKEEDSVEDCPESSSSPESRNKV 177

Query: 103 TQNLRQNSSTPEPSSDRSHDKETKNGAGPREGK 5
            Q  +QNSS  E S D+  +K+T+N A P +GK
Sbjct: 178 AQTKKQNSSISEASKDQKPNKDTENDADPWDGK 210


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