BLASTX nr result

ID: Atractylodes21_contig00047019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047019
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17281.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002264012.1| PREDICTED: U3 small nucleolar RNA-associated...   133   2e-29
ref|XP_004139015.1| PREDICTED: small subunit processome componen...   132   4e-29
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm...   123   1e-26
ref|XP_003601650.1| Small subunit processome component-like prot...   122   4e-26

>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
          Length = 2629

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/74 (85%), Positives = 69/74 (93%)
 Frame = +1

Query: 46  MATQSHAQAVKSLNKGAGRRRFVFKTFSQRIEEIDVDVFRSLDPLKPEPSEGSSFFRDCL 225
           MAT  HAQAVKSLNK +GR+RFVFK FSQR+EEI++DVFRSLDPLK EPSEGSSFFRDCL
Sbjct: 1   MATSFHAQAVKSLNKSSGRKRFVFKNFSQRLEEIEIDVFRSLDPLKTEPSEGSSFFRDCL 60

Query: 226 VEWRELNTAEDFIS 267
           V+WRELNTAEDFIS
Sbjct: 61  VQWRELNTAEDFIS 74


>ref|XP_002264012.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Vitis
           vinifera]
          Length = 224

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/74 (85%), Positives = 69/74 (93%)
 Frame = +1

Query: 46  MATQSHAQAVKSLNKGAGRRRFVFKTFSQRIEEIDVDVFRSLDPLKPEPSEGSSFFRDCL 225
           MAT  HAQAVKSLNK +GR+RFVFK FSQR+EEI++DVFRSLDPLK EPSEGSSFFRDCL
Sbjct: 1   MATSFHAQAVKSLNKSSGRKRFVFKNFSQRLEEIEIDVFRSLDPLKTEPSEGSSFFRDCL 60

Query: 226 VEWRELNTAEDFIS 267
           V+WRELNTAEDFIS
Sbjct: 61  VQWRELNTAEDFIS 74


>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
           sativus]
          Length = 2696

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/74 (83%), Positives = 69/74 (93%)
 Frame = +1

Query: 46  MATQSHAQAVKSLNKGAGRRRFVFKTFSQRIEEIDVDVFRSLDPLKPEPSEGSSFFRDCL 225
           MAT SHAQAVKSLNK  GRRRFVF+TFSQR++EID+DV+RSLD +K EPSEGSSFFRDCL
Sbjct: 1   MATASHAQAVKSLNKSPGRRRFVFQTFSQRVQEIDIDVYRSLDKVKSEPSEGSSFFRDCL 60

Query: 226 VEWRELNTAEDFIS 267
           +EWRELNTAEDFIS
Sbjct: 61  IEWRELNTAEDFIS 74


>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
           gi|223542637|gb|EEF44174.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2535

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/74 (81%), Positives = 66/74 (89%)
 Frame = +1

Query: 46  MATQSHAQAVKSLNKGAGRRRFVFKTFSQRIEEIDVDVFRSLDPLKPEPSEGSSFFRDCL 225
           MAT SHAQAVKSLNK  G RRFVFK+ SQRI EI++DV+RSLD +K +PSEGSSFFRDCL
Sbjct: 1   MATASHAQAVKSLNKSPGGRRFVFKSLSQRIVEIEIDVYRSLDKVKSQPSEGSSFFRDCL 60

Query: 226 VEWRELNTAEDFIS 267
           VEWRELNTAEDFIS
Sbjct: 61  VEWRELNTAEDFIS 74


>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago
           truncatula] gi|355490698|gb|AES71901.1| Small subunit
           processome component-like protein [Medicago truncatula]
          Length = 2733

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/74 (77%), Positives = 66/74 (89%)
 Frame = +1

Query: 46  MATQSHAQAVKSLNKGAGRRRFVFKTFSQRIEEIDVDVFRSLDPLKPEPSEGSSFFRDCL 225
           MAT +HAQAVKSLNK  GRRRFVFK+FS R+++ID++V+RSL  +K EPSEGSSFFRDCL
Sbjct: 1   MATPAHAQAVKSLNKSPGRRRFVFKSFSDRVDDIDINVYRSLHKVKAEPSEGSSFFRDCL 60

Query: 226 VEWRELNTAEDFIS 267
           VEWRELNT EDFIS
Sbjct: 61  VEWRELNTTEDFIS 74


Top