BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046474
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]    49   1e-09
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...    50   2e-08
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...    50   2e-08
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]      50   3e-08
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    46   3e-08

>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score = 49.3 bits (116), Expect(2) = 1e-09
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = -2

Query: 361 TKLWHLRLGRTAESKLHALQKCKIIKG-ELESSDFFEDCALGKQTRVTFGEAKHTTARIF 185
           T+LWH RLG  +E  L  L K  ++ G E     F E C +GKQ RV F    HTT  + 
Sbjct: 745 TELWHRRLGHMSEKGLSILSKQGLLSGAETGKLKFCETCVMGKQRRVKFSMGSHTTNGVL 804

Query: 184 DCVY 173
           + ++
Sbjct: 805 EYIH 808



 Score = 38.1 bits (87), Expect(2) = 1e-09
 Identities = 19/57 (33%), Positives = 32/57 (56%)
 Frame = -3

Query: 180 VYTYVWGPASTKSHNKC*YFVSFSVVFLIKFGSLSSNRKYVVFEKFKQ*LALMENQT 10
           +++ +WGP+  +SH+ C Y+V+F   F  K        K  VF KFK+   ++E +T
Sbjct: 807 IHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRT 863


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1262

 Score = 50.4 bits (119), Expect(2) = 2e-08
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -2

Query: 364 STKLWHLRLGRTAESKLHALQKCKIIKGE-LESSDFFEDCALGKQTRVTFGEAKHTTARI 188
           +T LWH+RLG  +E  L  L K  ++ G+ ++   F E C  GK  RV F  + HTT  I
Sbjct: 447 ATNLWHMRLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGI 506

Query: 187 FDCVY 173
            D V+
Sbjct: 507 LDYVH 511



 Score = 32.7 bits (73), Expect(2) = 2e-08
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = -3

Query: 180 VYTYVWGPASTKSHNKC*YFVSFSVVFLIKFGSLSSNRKYVVFEKFKQ*LALMENQTRRK 1
           V++ +WGPA   S     Y ++    +  K        KY  F+ FK+   ++E QT RK
Sbjct: 510 VHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERK 569


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score = 50.4 bits (119), Expect(2) = 2e-08
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -2

Query: 364 STKLWHLRLGRTAESKLHALQKCKIIKGE-LESSDFFEDCALGKQTRVTFGEAKHTTARI 188
           +T LWH+RLG  +E  L  L K  ++ G+ ++   F E C  GK  RV F  + HTT  I
Sbjct: 393 ATNLWHMRLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGI 452

Query: 187 FDCVY 173
            D V+
Sbjct: 453 LDYVH 457



 Score = 32.7 bits (73), Expect(2) = 2e-08
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = -3

Query: 180 VYTYVWGPASTKSHNKC*YFVSFSVVFLIKFGSLSSNRKYVVFEKFKQ*LALMENQTRRK 1
           V++ +WGPA   S     Y ++    +  K        KY  F+ FK+   ++E QT RK
Sbjct: 456 VHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERK 515


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score = 50.1 bits (118), Expect(2) = 3e-08
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = -2

Query: 364 STKLWHLRLGRTAESKLHALQKCKIIKGE-LESSDFFEDCALGKQTRVTFGEAKHTTARI 188
           +T LWH+RLG  +E  L  L K  ++ G+ +    F E C  GK  RV F  + HTT  I
Sbjct: 404 ATNLWHMRLGHMSEIGLAELSKRGLLDGQSIRKLKFCEHCIFGKHKRVKFNTSTHTTEGI 463

Query: 187 FDCVY 173
            D V+
Sbjct: 464 LDYVH 468



 Score = 32.7 bits (73), Expect(2) = 3e-08
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = -3

Query: 180 VYTYVWGPASTKSHNKC*YFVSFSVVFLIKFGSLSSNRKYVVFEKFKQ*LALMENQTRRK 1
           V++ +WGPA   S     Y ++    +  K        KY  F+ FK+   ++E QT RK
Sbjct: 467 VHSDLWGPAHKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDGFKEWKTMVERQTERK 526


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 46.2 bits (108), Expect(2) = 3e-08
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -2

Query: 361 TKLWHLRLGRTAESKLHALQKCKIIKG-ELESSDFFEDCALGKQTRVTFGEAKHTTARIF 185
           TKLWH+RLG   E  +  L K  ++ G +++S +F E C  GK  R  F +A H T    
Sbjct: 411 TKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTL 470

Query: 184 DCVY 173
           D ++
Sbjct: 471 DYIH 474



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -3

Query: 180 VYTYVWGPASTKSHNKC*YFVSFSVVFLIKFGSLSSNRKYVVFEKFKQ*LALMENQTRRK 1
           +++  WGP   +S   C +FVS    +           K   F+KFK+   LMENQT +K
Sbjct: 473 IHSDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKK 532