BLASTX nr result

ID: Atractylodes21_contig00046455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046455
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi...   144   6e-33
ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containi...   127   9e-28
ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27
ref|XP_002879744.1| pentatricopeptide repeat-containing protein ...   122   4e-26

>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  144 bits (364), Expect = 6e-33
 Identities = 65/105 (61%), Positives = 84/105 (80%)
 Frame = +2

Query: 59  FALYNCDPTPSSYCFVIKTLIKTSQPHHIPPVLDHLEKIEKFETPESVFIDLIEFHGEKN 238
           F +YN DPTP++Y FVI TL +  Q HH+PP+L  LEK+EKFETPE +F +LI+ +G  N
Sbjct: 68  FRIYNSDPTPNAYRFVISTLTRCRQFHHLPPLLHRLEKVEKFETPEFIFTNLIKVYGNAN 127

Query: 239 EFQQAIDLFFRLPTFRCIPSVDSLNCLLSVLCERKEGLVVVPQVL 373
            F+ A+DLFFR+P FRC+PSV SLN LL VLC+R+EGLV+VPQ+L
Sbjct: 128 MFEDAVDLFFRIPNFRCVPSVYSLNALLYVLCKRREGLVMVPQIL 172


>ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|222855149|gb|EEE92696.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  135 bits (339), Expect = 5e-30
 Identities = 60/105 (57%), Positives = 81/105 (77%)
 Frame = +2

Query: 59  FALYNCDPTPSSYCFVIKTLIKTSQPHHIPPVLDHLEKIEKFETPESVFIDLIEFHGEKN 238
           F++Y+ +P P ++ F+ KTL+KTSQ HHIP VLDHLEK+E FE PES F  LIE +G  N
Sbjct: 68  FSIYDVEPAPKAFDFIFKTLVKTSQFHHIPSVLDHLEKVESFEPPESTFAYLIEVYGRTN 127

Query: 239 EFQQAIDLFFRLPTFRCIPSVDSLNCLLSVLCERKEGLVVVPQVL 373
           +  +AI+LF+R+P FRC+PSV SLN L+SVLC   +GL +VP++L
Sbjct: 128 KTHEAIELFYRIPKFRCVPSVYSLNTLISVLCRNSKGLKLVPEIL 172


>ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Glycine max]
          Length = 499

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/105 (56%), Positives = 78/105 (74%)
 Frame = +2

Query: 59  FALYNCDPTPSSYCFVIKTLIKTSQPHHIPPVLDHLEKIEKFETPESVFIDLIEFHGEKN 238
           F  Y+ DPTP +Y FV+KTL  TSQ   IPPVL HLE +EKFETPES+ + LI F+G  +
Sbjct: 73  FKAYSIDPTPKAYFFVLKTLTSTSQLQDIPPVLYHLEHLEKFETPESILVYLIRFYGLSD 132

Query: 239 EFQQAIDLFFRLPTFRCIPSVDSLNCLLSVLCERKEGLVVVPQVL 373
             Q A+DLFFR+P FRC P+V SLN +LS+LC +++ L +VP++L
Sbjct: 133 RVQDAVDLFFRIPRFRCTPTVCSLNLVLSLLCRKRDCLEMVPEIL 177


>ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Cucumis sativus]
           gi|449483740|ref|XP_004156675.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Cucumis sativus]
          Length = 491

 Score =  124 bits (312), Expect = 6e-27
 Identities = 55/105 (52%), Positives = 75/105 (71%)
 Frame = +2

Query: 59  FALYNCDPTPSSYCFVIKTLIKTSQPHHIPPVLDHLEKIEKFETPESVFIDLIEFHGEKN 238
           F  Y+C PTP++Y FV+KTL +TSQ HHIPPVL  L+ +E F+TPE +F+DLI+ +G  N
Sbjct: 63  FTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIKLYGRMN 122

Query: 239 EFQQAIDLFFRLPTFRCIPSVDSLNCLLSVLCERKEGLVVVPQVL 373
             Q A+ LF R+P FRC+PS  SLN LLS L    +GL ++P ++
Sbjct: 123 RIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDII 167


>ref|XP_002879744.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325583|gb|EFH56003.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 444

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/105 (53%), Positives = 78/105 (74%)
 Frame = +2

Query: 59  FALYNCDPTPSSYCFVIKTLIKTSQPHHIPPVLDHLEKIEKFETPESVFIDLIEFHGEKN 238
           F L+NC+PTP +Y FVI+TL KTSQ  +I  VLDHLE  EKF+TPES+F D+I  +G   
Sbjct: 54  FQLHNCEPTPQAYRFVIETLAKTSQLENIASVLDHLEVSEKFDTPESIFRDVIAAYGFSG 113

Query: 239 EFQQAIDLFFRLPTFRCIPSVDSLNCLLSVLCERKEGLVVVPQVL 373
             ++AID+FF++P FRC+PS  +LN LL VL  +++ L +VP++L
Sbjct: 114 RIEEAIDVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEIL 158


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