BLASTX nr result

ID: Atractylodes21_contig00046441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046441
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   134   6e-30
ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homol...   131   7e-29
ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   130   9e-29
emb|CBI40768.3| unnamed protein product [Vitis vinifera]              130   9e-29
ref|NP_565132.2| RNA recognition motif-containing protein [Arabi...   129   2e-28

>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/89 (70%), Positives = 72/89 (80%)
 Frame = -3

Query: 269 TGRSKGYGFVTFRDPESAAKACVDPAPVIDGRRANCNLASLGRPRPALPFAGHITSPIPY 90
           TGRSKGYGFVTFRDPE+A +AC DP+PVIDGRRANCNLASLGRPRP LP+ G I    PY
Sbjct: 69  TGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLPY-GRIRPASPY 127

Query: 89  AGGVQAARVPSIGSYGYQQPLFYSYRQGL 3
            G +Q AR   +G +GYQQP+ YSY+QGL
Sbjct: 128 VGSLQPARGAYVGGFGYQQPVSYSYQQGL 156


>ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cucumis
           sativus] gi|449531145|ref|XP_004172548.1| PREDICTED:
           RNA-binding protein Musashi homolog 2-like [Cucumis
           sativus]
          Length = 286

 Score =  131 bits (329), Expect = 7e-29
 Identities = 61/90 (67%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
 Frame = -3

Query: 269 TGRSKGYGFVTFRDPESAAKACVDPAPVIDGRRANCNLASLGRPRPALPF-AGHITSPIP 93
           TGRSKGYGFVTFRDPESA +AC DP P+IDGRRANCNLASLGRPRP L +  G +  P  
Sbjct: 69  TGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPLSYGTGRLRQPAV 128

Query: 92  YAGGVQAARVPSIGSYGYQQPLFYSYRQGL 3
           Y GG+Q  R   IG++GYQQP+ Y+Y+QGL
Sbjct: 129 YVGGMQPNRGTYIGNFGYQQPVSYAYQQGL 158


>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  130 bits (328), Expect = 9e-29
 Identities = 60/88 (68%), Positives = 72/88 (81%)
 Frame = -3

Query: 269 TGRSKGYGFVTFRDPESAAKACVDPAPVIDGRRANCNLASLGRPRPALPFAGHITSPIPY 90
           TGRSKGYGFVTFRDPESA +AC+DPAP+IDGRRANCNLASLGRPRP++ + G +    PY
Sbjct: 69  TGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMSY-GRLRPVTPY 127

Query: 89  AGGVQAARVPSIGSYGYQQPLFYSYRQG 6
            G V A R   +G++GYQQP+ YSY+QG
Sbjct: 128 LGSVPATRGSYVGNFGYQQPVSYSYQQG 155


>emb|CBI40768.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  130 bits (328), Expect = 9e-29
 Identities = 60/88 (68%), Positives = 72/88 (81%)
 Frame = -3

Query: 269 TGRSKGYGFVTFRDPESAAKACVDPAPVIDGRRANCNLASLGRPRPALPFAGHITSPIPY 90
           TGRSKGYGFVTFRDPESA +AC+DPAP+IDGRRANCNLASLGRPRP++ + G +    PY
Sbjct: 69  TGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMSY-GRLRPVTPY 127

Query: 89  AGGVQAARVPSIGSYGYQQPLFYSYRQG 6
            G V A R   +G++GYQQP+ YSY+QG
Sbjct: 128 LGSVPATRGSYVGNFGYQQPVSYSYQQG 155


>ref|NP_565132.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|332197724|gb|AEE35845.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 285

 Score =  129 bits (324), Expect = 2e-28
 Identities = 62/95 (65%), Positives = 71/95 (74%), Gaps = 6/95 (6%)
 Frame = -3

Query: 269 TGRSKGYGFVTFRDPESAAKACVDPAPVIDGRRANCNLASLGRPRPALPFA------GHI 108
           TGRSKGYGFVTFRDPE+A +AC DP P+IDGRRANCNLASLGRPRP LP+A      G +
Sbjct: 61  TGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPYAVIPNMPGRL 120

Query: 107 TSPIPYAGGVQAARVPSIGSYGYQQPLFYSYRQGL 3
               PY G VQ  R   IG+Y YQQPL Y+Y+QG+
Sbjct: 121 RPASPYIGNVQGPRGSLIGNYPYQQPLPYNYQQGV 155


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