BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046417
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]          88   2e-35
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...    81   1e-29
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...    81   1e-29
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]            80   3e-29
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]      83   3e-29

>gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 358

 Score = 88.2 bits (217), Expect(2) = 2e-35
 Identities = 42/51 (82%), Positives = 44/51 (86%)
 Frame = +3

Query: 186 KAYMSWVPYYSVVGSLMYAMIYTRLDLAYAVSMVSRYMANPGKEHWQAVMW 338
           K YMS VPY S VGSLMYAMI TR DLAYAVSMVSRYMANPG+EHW+AV W
Sbjct: 181 KEYMSRVPYSSAVGSLMYAMICTRPDLAYAVSMVSRYMANPGREHWKAVQW 231



 Score = 85.9 bits (211), Expect(2) = 2e-35
 Identities = 46/65 (70%), Positives = 53/65 (81%), Gaps = 3/65 (4%)
 Frame = +2

Query: 2   KDQLNEKFEMKDLGSAREIIGMEISKDRTAGTLTLSQRS---*VLKRFNMDGAKAVSTPF 172
           KDQLN +FEMKDLG AR+I G+EIS+DR A TLTLSQRS    VLKRFNM GAK V+TP 
Sbjct: 104 KDQLNTEFEMKDLGKARKIFGIEISRDRKARTLTLSQRSYVEKVLKRFNMYGAKTVNTPI 163

Query: 173 ASYFK 187
           A++FK
Sbjct: 164 AAHFK 168


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score = 81.3 bits (199), Expect(2) = 1e-29
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = +3

Query: 192  YMSWVPYYSVVGSLMYAMIYTRLDLAYAVSMVSRYMANPGKEHWQAVMW 338
            YMS VPY S VGSLMYAM+ +R DL+YA+S+VSRYM+NPGKEHW+AV W
Sbjct: 1111 YMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQW 1159



 Score = 73.6 bits (179), Expect(2) = 1e-29
 Identities = 39/65 (60%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
 Frame = +2

Query: 2    KDQLNEKFEMKDLGSAREIIGMEISKDRTAGTLTLSQRS---*VLKRFNMDGAKAVSTPF 172
            K  L+ +F+MKDLGSA++I+GMEIS+DR +G L LSQ +    VL+RFNM  AKAVSTP 
Sbjct: 1032 KKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPI 1091

Query: 173  ASYFK 187
            A +FK
Sbjct: 1092 APHFK 1096


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score = 81.3 bits (199), Expect(2) = 1e-29
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = +3

Query: 192  YMSWVPYYSVVGSLMYAMIYTRLDLAYAVSMVSRYMANPGKEHWQAVMW 338
            YMS VPY S VGSLMYAM+ +R DL+YA+S+VSRYM+NPGKEHW+AV W
Sbjct: 1111 YMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQW 1159



 Score = 73.6 bits (179), Expect(2) = 1e-29
 Identities = 39/65 (60%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
 Frame = +2

Query: 2    KDQLNEKFEMKDLGSAREIIGMEISKDRTAGTLTLSQRS---*VLKRFNMDGAKAVSTPF 172
            K  L+ +F+MKDLGSA++I+GMEIS+DR +G L LSQ +    VL+RFNM  AKAVSTP 
Sbjct: 1032 KKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPI 1091

Query: 173  ASYFK 187
            A +FK
Sbjct: 1092 APHFK 1096


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score = 80.1 bits (196), Expect(2) = 3e-29
 Identities = 35/49 (71%), Positives = 43/49 (87%)
 Frame = +3

Query: 192  YMSWVPYYSVVGSLMYAMIYTRLDLAYAVSMVSRYMANPGKEHWQAVMW 338
            YMS VPY S VGSLMYAM+ +R DL+YA+S+VSRYM+NPGKEHW+A+ W
Sbjct: 1113 YMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQW 1161



 Score = 73.6 bits (179), Expect(2) = 3e-29
 Identities = 39/65 (60%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
 Frame = +2

Query: 2    KDQLNEKFEMKDLGSAREIIGMEISKDRTAGTLTLSQRS---*VLKRFNMDGAKAVSTPF 172
            K  L+ +F+MKDLGSA++I+GMEIS+DR +G L LSQ +    VL+RFNM  AKAVSTP 
Sbjct: 1034 KKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPI 1093

Query: 173  ASYFK 187
            A +FK
Sbjct: 1094 APHFK 1098


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score = 83.2 bits (204), Expect(2) = 3e-29
 Identities = 37/49 (75%), Positives = 44/49 (89%)
 Frame = +3

Query: 192  YMSWVPYYSVVGSLMYAMIYTRLDLAYAVSMVSRYMANPGKEHWQAVMW 338
            YMS VPY SVVGSLMYAM+ +RLDL++A+S+VSRYMANPGKEHW+ V W
Sbjct: 989  YMSRVPYLSVVGSLMYAMVCSRLDLSHALSVVSRYMANPGKEHWKVVQW 1037



 Score = 70.5 bits (171), Expect(2) = 3e-29
 Identities = 36/65 (55%), Positives = 51/65 (78%), Gaps = 3/65 (4%)
 Frame = +2

Query: 2    KDQLNEKFEMKDLGSAREIIGMEISKDRTAGTLTLSQR---S*VLKRFNMDGAKAVSTPF 172
            K QL+ +FEMKDLG+A++I+GMEI+++R +G L LSQ+     VL+RFNM  AK VSTP 
Sbjct: 910  KAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPL 969

Query: 173  ASYFK 187
            A++F+
Sbjct: 970  AAHFR 974