BLASTX nr result

ID: Atractylodes21_contig00046367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046367
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL99232.1| transducin/WD40 domain-containing protein, partia...   188   3e-46
gb|AEL99231.1| transducin/WD40 domain-containing protein, partia...   188   3e-46
ref|XP_002517246.1| chromatin assembly factor I P60 subunit, put...   186   2e-45
ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arab...   182   3e-44
ref|NP_974992.1| transducin/WD40 domain-containing protein [Arab...   181   5e-44

>gb|AEL99232.1| transducin/WD40 domain-containing protein, partial [Silene
           latifolia]
          Length = 231

 Score =  188 bits (478), Expect = 3e-46
 Identities = 91/115 (79%), Positives = 97/115 (84%)
 Frame = -3

Query: 416 RKDLSRPALMFPGASKAVVAVRFCPLAFSLRGLXXXXSFKLPYRLIFAVATLNSLYVYDT 237
           RKDLSRPAL  PGASK V+AVRFCPLAFSLRG       KLPYRLIFAVATLNSLY+YDT
Sbjct: 117 RKDLSRPALRLPGASKPVIAVRFCPLAFSLRGSNSPGFSKLPYRLIFAVATLNSLYIYDT 176

Query: 236 ECIEPIAVLAGLHYAAITDIAWSPTAKFLALSSQDGYCTLLEFENDELGLPVPFS 72
           EC+ P+AVLAGLHYAAITDI WSP  K+LALSSQDGYCTL+EF NDELG P P S
Sbjct: 177 ECVAPLAVLAGLHYAAITDITWSPNGKYLALSSQDGYCTLVEFHNDELGSPFPIS 231


>gb|AEL99231.1| transducin/WD40 domain-containing protein, partial [Silene
           latifolia]
          Length = 231

 Score =  188 bits (478), Expect = 3e-46
 Identities = 91/115 (79%), Positives = 97/115 (84%)
 Frame = -3

Query: 416 RKDLSRPALMFPGASKAVVAVRFCPLAFSLRGLXXXXSFKLPYRLIFAVATLNSLYVYDT 237
           RKDLSRPAL  PGASK V+AVRFCPLAFSLRG       KLPYRLIFAVATLNSLY+YDT
Sbjct: 117 RKDLSRPALRLPGASKPVIAVRFCPLAFSLRGSNSPGFSKLPYRLIFAVATLNSLYIYDT 176

Query: 236 ECIEPIAVLAGLHYAAITDIAWSPTAKFLALSSQDGYCTLLEFENDELGLPVPFS 72
           EC+ P+AVLAGLHYAAITDI WSP  K+LALSSQDGYCTL+EF NDELG P P S
Sbjct: 177 ECVAPLAVLAGLHYAAITDITWSPNGKYLALSSQDGYCTLVEFHNDELGSPFPIS 231


>ref|XP_002517246.1| chromatin assembly factor I P60 subunit, putative [Ricinus
           communis] gi|223543617|gb|EEF45146.1| chromatin assembly
           factor I P60 subunit, putative [Ricinus communis]
          Length = 455

 Score =  186 bits (472), Expect = 2e-45
 Identities = 90/129 (69%), Positives = 105/129 (81%)
 Frame = -3

Query: 416 RKDLSRPALMFPGASKAVVAVRFCPLAFSLRGLXXXXSFKLPYRLIFAVATLNSLYVYDT 237
           RKD SRPAL+ PGASK VVAVRFCP+AFSLR       FKLPYRLIFAVATLNSLY+YDT
Sbjct: 266 RKDFSRPALLLPGASKPVVAVRFCPMAFSLRESHSAGFFKLPYRLIFAVATLNSLYIYDT 325

Query: 236 ECIEPIAVLAGLHYAAITDIAWSPTAKFLALSSQDGYCTLLEFENDELGLPVPFSEDKQV 57
           E   PIA+LAGLHYAAITDIAWS  A++LA+SSQDGYCTL+EFE +ELGLP+   E K  
Sbjct: 326 ESAPPIAILAGLHYAAITDIAWSSNAQYLAVSSQDGYCTLVEFEINELGLPITLGEHKND 385

Query: 56  VADQNKIIV 30
           + ++NK ++
Sbjct: 386 IVEENKSLI 394


>ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arabidopsis lyrata subsp.
           lyrata] gi|297310746|gb|EFH41170.1| hypothetical protein
           ARALYDRAFT_496675 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score =  182 bits (461), Expect = 3e-44
 Identities = 94/140 (67%), Positives = 108/140 (77%), Gaps = 4/140 (2%)
 Frame = -3

Query: 416 RKDLSRPALMFPGASKAVVAVRFCPLAFSLRGLXXXXSF-KLPYRLIFAVATLNSLYVYD 240
           RKDLSRPAL  PGASK VV VRFCP+AF LRG      F KLPYRL+FA+ATLNS+Y+YD
Sbjct: 267 RKDLSRPALQLPGASKPVVVVRFCPVAFKLRGSHSEEGFFKLPYRLVFAIATLNSVYIYD 326

Query: 239 TECIEPIAVLAGLHYAAITDIAWSPTAKFLALSSQDGYCTLLEFENDELGLPVPFS---E 69
           TEC+ PIAVLAGLHYAAITDI WSP A +LALSSQDGYCTL+EFE++ELG  +P S    
Sbjct: 327 TECVAPIAVLAGLHYAAITDITWSPNASYLALSSQDGYCTLVEFEDNELGESIPISITVG 386

Query: 68  DKQVVADQNKIIVHDLESME 9
            K V A++ K   HDLE  +
Sbjct: 387 RKPVDAEEKK---HDLEKAD 403


>ref|NP_974992.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332010545|gb|AED97928.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 428

 Score =  181 bits (459), Expect = 5e-44
 Identities = 93/134 (69%), Positives = 104/134 (77%), Gaps = 1/134 (0%)
 Frame = -3

Query: 416 RKDLSRPALMFPGASKAVVAVRFCPLAFSLRGLXXXXSF-KLPYRLIFAVATLNSLYVYD 240
           RKDLSRPAL  PGASK VV VRFCP+AF LRG      F KLPYRL+FA+ATLNS+Y+YD
Sbjct: 208 RKDLSRPALQLPGASKPVVVVRFCPVAFKLRGSSSEEGFFKLPYRLVFAIATLNSVYIYD 267

Query: 239 TECIEPIAVLAGLHYAAITDIAWSPTAKFLALSSQDGYCTLLEFENDELGLPVPFSEDKQ 60
           TEC+ PIAVLAGLHYAAITDI WSP A +LALSSQDGYCTL+EFE+ ELG  V  S  K+
Sbjct: 268 TECVAPIAVLAGLHYAAITDITWSPNASYLALSSQDGYCTLVEFEDKELGEAVSISVGKK 327

Query: 59  VVADQNKIIVHDLE 18
            V  + K   HDLE
Sbjct: 328 PVDGEEK--KHDLE 339