BLASTX nr result

ID: Atractylodes21_contig00046352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046352
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]    72   4e-11
emb|CAA19696.1| putative LTR retrotransposon (fragment) [Arabido...    70   1e-10
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]    70   2e-10
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]    69   5e-10
ref|XP_003604634.1| hypothetical protein MTR_4g015340 [Medicago ...    67   1e-09

>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/86 (41%), Positives = 51/86 (59%)
 Frame = +1

Query: 34  FHSMHPIQQTTITLPDHSQISVAMAGEVILSHDITLKNILFIPEFKFNLISVRALLAESD 213
           F S   +Q   +TLP    + +   G VILS D+ L N+LF+P F++NL+SV A      
Sbjct: 298 FDSSIDVQNVRVTLPTGITVPIDRVGSVILSKDVKLLNVLFVPTFRYNLLSVSAFTDTLS 357

Query: 214 LMIIFMPNFVMIQEISSKKMIGKGDK 291
           L ++F P+  +IQE S  KMIGKG +
Sbjct: 358 LSMVFTPDACIIQEPSRGKMIGKGSR 383


>emb|CAA19696.1| putative LTR retrotransposon (fragment) [Arabidopsis thaliana]
           gi|7268775|emb|CAB78981.1| putative LTR retrotransposon
           (fragment) [Arabidopsis thaliana]
          Length = 281

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/102 (36%), Positives = 58/102 (56%)
 Frame = +1

Query: 19  HNWDQFHSMHPIQQTTITLPDHSQISVAMAGEVILSHDITLKNILFIPEFKFNLISVRAL 198
           HN D +     ++ T + LP+  ++ +A  G + LS  I+L N+L+IPEFKFNLISV  L
Sbjct: 15  HNRDLYLDFRSLENTFVRLPNDCRVKIAGIGFIQLSDAISLHNVLYIPEFKFNLISVSVL 74

Query: 199 LAESDLMIIFMPNFVMIQEISSKKMIGKGDKIFVPYVLRIAE 324
                  + F  +   +QE++ + MIG+G ++   YVL   E
Sbjct: 75  TKFLKTKVSFTSDEFFVQELTKELMIGRGSEVGNLYVLDFNE 116


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/86 (40%), Positives = 50/86 (58%)
 Frame = +1

Query: 34  FHSMHPIQQTTITLPDHSQISVAMAGEVILSHDITLKNILFIPEFKFNLISVRALLAESD 213
           F S   +Q   +TLP    + +   G VILS D+ L N+LF+P F++NL+SV A      
Sbjct: 297 FDSSIXVQNVRVTLPTGITVPIDRVGSVILSKDVKLLNVLFVPTFRYNLLSVSAFTDTLS 356

Query: 214 LMIIFMPNFVMIQEISSKKMIGKGDK 291
           L ++F P+  +IQ  S  KMIGKG +
Sbjct: 357 LSMVFTPDACIIQXPSRGKMIGKGSR 382


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/88 (38%), Positives = 51/88 (57%)
 Frame = +1

Query: 22  NWDQFHSMHPIQQTTITLPDHSQISVAMAGEVILSHDITLKNILFIPEFKFNLISVRALL 201
           N   FHS+H     T+TLP  ++I +   G + LS  + L+++L+IP F+FNLIS+ AL 
Sbjct: 387 NSSMFHSIHSFSSNTVTLPTGTKIPITGIGTIHLSPHLVLEHVLYIPTFQFNLISISALT 446

Query: 202 AESDLMIIFMPNFVMIQEISSKKMIGKG 285
             +     F  +F  IQ+ S  K+IG G
Sbjct: 447 QTNCFSFDFTAHFCFIQDHSQGKLIGMG 474


>ref|XP_003604634.1| hypothetical protein MTR_4g015340 [Medicago truncatula]
           gi|355505689|gb|AES86831.1| hypothetical protein
           MTR_4g015340 [Medicago truncatula]
          Length = 317

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/96 (36%), Positives = 56/96 (58%)
 Frame = +1

Query: 34  FHSMHPIQQTTITLPDHSQISVAMAGEVILSHDITLKNILFIPEFKFNLISVRALLAESD 213
           F S HPI+   I LP+ + I++  AG VI S    + N+L+ P F  NLIS+  +++  +
Sbjct: 144 FTSYHPIKPVLIHLPNKTTITIHHAGTVIFSPHFHITNVLYSPNFNVNLISIAKIISSLN 203

Query: 214 LMIIFMPNFVMIQEISSKKMIGKGDKIFVPYVLRIA 321
             + F+P+  +IQ++ + KMIG  D     Y LRI+
Sbjct: 204 CYVKFLPDKCIIQDLITNKMIGLADPYGGLYKLRIS 239


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