BLASTX nr result

ID: Atractylodes21_contig00046326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046326
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531700.1| PREDICTED: (6-4)DNA photolyase-like [Glycine...    89   3e-16
ref|XP_002304163.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
emb|CAN80978.1| hypothetical protein VITISV_029095 [Vitis vinifera]    86   2e-15
ref|XP_002285327.2| PREDICTED: (6-4)DNA photolyase [Vitis vinifera]    86   3e-15
emb|CBI36257.3| unnamed protein product [Vitis vinifera]               86   3e-15

>ref|XP_003531700.1| PREDICTED: (6-4)DNA photolyase-like [Glycine max]
          Length = 535

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/66 (60%), Positives = 52/66 (78%)
 Frame = -1

Query: 367 GKDYPKPVISHDAASKECKRKLAAAYELNKKTNSMVSDEDMQNLRRKLVEDHSQGTSSKR 188
           GKDYP PV+SHD+ASKEC+RK+  AY LNK+ N +VS++D++NLRRKL E   Q   +KR
Sbjct: 469 GKDYPMPVVSHDSASKECRRKMGEAYALNKELNGLVSEDDLKNLRRKLDESEGQEAGAKR 528

Query: 187 LKQKLI 170
            KQ+LI
Sbjct: 529 YKQQLI 534


>ref|XP_002304163.1| predicted protein [Populus trichocarpa] gi|222841595|gb|EEE79142.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/65 (61%), Positives = 49/65 (75%)
 Frame = -1

Query: 367 GKDYPKPVISHDAASKECKRKLAAAYELNKKTNSMVSDEDMQNLRRKLVEDHSQGTSSKR 188
           G+DYPKPV+ HD+ASKECKRKLA AY LNKK N  +S ED+ NLRRKL +D  Q    +R
Sbjct: 472 GRDYPKPVVYHDSASKECKRKLAEAYALNKKLNGQLSQEDLDNLRRKLEQDEDQEPKIRR 531

Query: 187 LKQKL 173
            +QK+
Sbjct: 532 QRQKV 536


>emb|CAN80978.1| hypothetical protein VITISV_029095 [Vitis vinifera]
          Length = 633

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/66 (59%), Positives = 52/66 (78%)
 Frame = -1

Query: 367 GKDYPKPVISHDAASKECKRKLAAAYELNKKTNSMVSDEDMQNLRRKLVEDHSQGTSSKR 188
           GKDYPKPV+ HD+A KECKRKLA AY LNK+ +  V++ED++ LRRKL ED +  +++ R
Sbjct: 567 GKDYPKPVVCHDSAXKECKRKLAEAYALNKRLDGSVTEEDLKKLRRKLEEDENXESNTSR 626

Query: 187 LKQKLI 170
            +QKLI
Sbjct: 627 TRQKLI 632


>ref|XP_002285327.2| PREDICTED: (6-4)DNA photolyase [Vitis vinifera]
          Length = 564

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/66 (59%), Positives = 52/66 (78%)
 Frame = -1

Query: 367 GKDYPKPVISHDAASKECKRKLAAAYELNKKTNSMVSDEDMQNLRRKLVEDHSQGTSSKR 188
           GKDYPKPV+ HD+A KECKRKLA AY LNK+ +  V++ED++ LRRKL ED +  +++ R
Sbjct: 498 GKDYPKPVVCHDSAIKECKRKLAEAYALNKRLDGSVTEEDLKKLRRKLEEDENPESNTSR 557

Query: 187 LKQKLI 170
            +QKLI
Sbjct: 558 TRQKLI 563


>emb|CBI36257.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/66 (59%), Positives = 52/66 (78%)
 Frame = -1

Query: 367 GKDYPKPVISHDAASKECKRKLAAAYELNKKTNSMVSDEDMQNLRRKLVEDHSQGTSSKR 188
           GKDYPKPV+ HD+A KECKRKLA AY LNK+ +  V++ED++ LRRKL ED +  +++ R
Sbjct: 472 GKDYPKPVVCHDSAIKECKRKLAEAYALNKRLDGSVTEEDLKKLRRKLEEDENPESNTSR 531

Query: 187 LKQKLI 170
            +QKLI
Sbjct: 532 TRQKLI 537


Top