BLASTX nr result

ID: Atractylodes21_contig00046275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046275
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]                   274   1e-71
dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]                   274   1e-71
emb|CAA63753.1| cyclin A-like protein [Nicotiana tabacum]             266   2e-69
ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|2...   265   5e-69
ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|2...   262   5e-68

>dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]
          Length = 306

 Score =  274 bits (700), Expect = 1e-71
 Identities = 146/229 (63%), Positives = 172/229 (75%), Gaps = 7/229 (3%)
 Frame = +2

Query: 14  VRVTRLAKKRAMEAIG-SQLQPANKKRVILGELSN---NTVPLEHLKVGSGVVQKTKCRS 181
           +RVTRLAKKRA+EA+  S+ Q  +KKRV+LGEL N   N   ++     SG  ++ K ++
Sbjct: 8   IRVTRLAKKRAVEAMAASEQQRPSKKRVVLGELKNLSSNISSIQTYDFSSGPQKQQKNKN 67

Query: 182 XXXXXXXXXXXXXRQLAAEKTDDALT---DPQMCEAYVSDIFEYLHNMEMEEKRRALADY 352
                         +   E   D  +   DPQMC AYVSDI+EYLH MEME KRR L DY
Sbjct: 68  KRKAKESLGFEVKEKKVEEAGIDVFSQSDDPQMCGAYVSDIYEYLHKMEMETKRRPLPDY 127

Query: 353 IEKVQKDITVNMRSVLVDWLVEVAEEYKLHPDTLYLTISYIDRFLSVNALNRQRLQLLGV 532
           ++KVQKD+T NMR VL+DWLVEVAEEYKL PDTLYLT+SYIDRFLS+NAL+RQ+LQLLGV
Sbjct: 128 LDKVQKDVTANMRGVLIDWLVEVAEEYKLLPDTLYLTVSYIDRFLSMNALSRQKLQLLGV 187

Query: 533 SSMLIASKYEEITPPHTEDFCYITDNTYTKQEVVKMEAEVLKTLKFEMG 679
           SSMLIASKYEEI+PPH EDFCYITDNTY K+EVVKMEA+VLK LKFEMG
Sbjct: 188 SSMLIASKYEEISPPHVEDFCYITDNTYKKEEVVKMEADVLKFLKFEMG 236


>dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]
          Length = 372

 Score =  274 bits (700), Expect = 1e-71
 Identities = 146/229 (63%), Positives = 172/229 (75%), Gaps = 7/229 (3%)
 Frame = +2

Query: 14  VRVTRLAKKRAMEAIG-SQLQPANKKRVILGELSN---NTVPLEHLKVGSGVVQKTKCRS 181
           +RVTRLAKKRA+EA+  S+ Q  +KKRV+LGEL N   N   ++     SG  ++ K ++
Sbjct: 8   IRVTRLAKKRAVEAMAASEQQRPSKKRVVLGELKNLSSNISSIQTYDFSSGPQKQQKNKN 67

Query: 182 XXXXXXXXXXXXXRQLAAEKTDDALT---DPQMCEAYVSDIFEYLHNMEMEEKRRALADY 352
                         +   E   D  +   DPQMC AYVSDI+EYLH MEME KRR L DY
Sbjct: 68  KRKAKESLGFEVKEKKVEEAGIDVFSQSDDPQMCGAYVSDIYEYLHKMEMETKRRPLPDY 127

Query: 353 IEKVQKDITVNMRSVLVDWLVEVAEEYKLHPDTLYLTISYIDRFLSVNALNRQRLQLLGV 532
           ++KVQKD+T NMR VL+DWLVEVAEEYKL PDTLYLT+SYIDRFLS+NAL+RQ+LQLLGV
Sbjct: 128 LDKVQKDVTANMRGVLIDWLVEVAEEYKLLPDTLYLTVSYIDRFLSMNALSRQKLQLLGV 187

Query: 533 SSMLIASKYEEITPPHTEDFCYITDNTYTKQEVVKMEAEVLKTLKFEMG 679
           SSMLIASKYEEI+PPH EDFCYITDNTY K+EVVKMEA+VLK LKFEMG
Sbjct: 188 SSMLIASKYEEISPPHVEDFCYITDNTYKKEEVVKMEADVLKFLKFEMG 236


>emb|CAA63753.1| cyclin A-like protein [Nicotiana tabacum]
          Length = 314

 Score =  266 bits (681), Expect = 2e-69
 Identities = 141/225 (62%), Positives = 167/225 (74%), Gaps = 3/225 (1%)
 Frame = +2

Query: 14  VRVTRLAKKRAMEAIGSQLQPANKKRVILGELSNNTVPLEHLKVGSGVVQKTKC--RSXX 187
           VRVTRLAKKRA EA+   LQ  NKKRV+LGE+ N +     +++      K KC  ++  
Sbjct: 8   VRVTRLAKKRAAEAMVQHLQQPNKKRVVLGEIRNLS---NQIQMFDSEPLKPKCNKQTTK 64

Query: 188 XXXXXXXXXXXRQLAAEKTDDALTD-PQMCEAYVSDIFEYLHNMEMEEKRRALADYIEKV 364
                      R+   E  D  L D PQMC AYVSDI+EYLH ME+E+KRR L+DY+EKV
Sbjct: 65  RKVKRSVSVKEREFREEDVDSKLDDDPQMCSAYVSDIYEYLHQMEIEKKRRPLSDYLEKV 124

Query: 365 QKDITVNMRSVLVDWLVEVAEEYKLHPDTLYLTISYIDRFLSVNALNRQRLQLLGVSSML 544
           QKD+T NMR VLVDWLVEVAEEYKL  DTLYL ++YIDR+LS+  + RQRLQLLGVSSML
Sbjct: 125 QKDVTANMRGVLVDWLVEVAEEYKLLSDTLYLAVAYIDRYLSIKVIPRQRLQLLGVSSML 184

Query: 545 IASKYEEITPPHTEDFCYITDNTYTKQEVVKMEAEVLKTLKFEMG 679
           IASKYEEI PP  EDFCYITDNTYTK++VVKMEA+VL++LKFEMG
Sbjct: 185 IASKYEEIKPPRVEDFCYITDNTYTKKDVVKMEADVLQSLKFEMG 229


>ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|222842883|gb|EEE80430.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  265 bits (678), Expect = 5e-69
 Identities = 140/221 (63%), Positives = 161/221 (72%)
 Frame = +2

Query: 17  RVTRLAKKRAMEAIGSQLQPANKKRVILGELSNNTVPLEHLKVGSGVVQKTKCRSXXXXX 196
           RVTR AKKRA     ++ QP NKKRV+LGEL N    L +  V S   QK K ++     
Sbjct: 9   RVTRAAKKRAAALASTEDQPLNKKRVVLGELPN----LSNAIVSSNEPQKQKAKAKPKAR 64

Query: 197 XXXXXXXXRQLAAEKTDDALTDPQMCEAYVSDIFEYLHNMEMEEKRRALADYIEKVQKDI 376
                     L  E  D    DPQMC  Y SDI+EYLH ME++ KRR L DYIEKVQKD+
Sbjct: 65  KGASTKKEGVLK-EDVDGNPEDPQMCAPYASDIYEYLHKMEVDPKRRPLPDYIEKVQKDV 123

Query: 377 TVNMRSVLVDWLVEVAEEYKLHPDTLYLTISYIDRFLSVNALNRQRLQLLGVSSMLIASK 556
           + NMR +LVDWLVEVAEEYKL  +TLYLT+SY+DRFLS N L+RQRLQLLGVSSML+ASK
Sbjct: 124 SPNMRGILVDWLVEVAEEYKLVSETLYLTVSYVDRFLSFNVLSRQRLQLLGVSSMLLASK 183

Query: 557 YEEITPPHTEDFCYITDNTYTKQEVVKMEAEVLKTLKFEMG 679
           YEEI PPH EDFCYITDNTYTK+EVVKMEA++LK+LKFEMG
Sbjct: 184 YEEINPPHVEDFCYITDNTYTKEEVVKMEADILKSLKFEMG 224


>ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|222835505|gb|EEE73940.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  262 bits (669), Expect = 5e-68
 Identities = 137/222 (61%), Positives = 161/222 (72%)
 Frame = +2

Query: 14  VRVTRLAKKRAMEAIGSQLQPANKKRVILGELSNNTVPLEHLKVGSGVVQKTKCRSXXXX 193
           VR+TR AKKRA     ++ +P NKKRV+LGEL N    L +  V    V K K ++    
Sbjct: 11  VRITRAAKKRAAALASAEDRPLNKKRVVLGELPN----LSNTTVSVNEVHKQKAKTKSNT 66

Query: 194 XXXXXXXXXRQLAAEKTDDALTDPQMCEAYVSDIFEYLHNMEMEEKRRALADYIEKVQKD 373
                      +  E  D    DPQMC  Y SDI+EYLH ME++ KRR L DYIEKVQKD
Sbjct: 67  SKRTLTKK-EGVFKEDVDGKPEDPQMCAPYASDIYEYLHKMEVDPKRRPLPDYIEKVQKD 125

Query: 374 ITVNMRSVLVDWLVEVAEEYKLHPDTLYLTISYIDRFLSVNALNRQRLQLLGVSSMLIAS 553
           ++ NMR +LVDWLVEVAEEYK+  DTLYLT+SYIDRFLS N LNRQRLQLLGVS+MLIAS
Sbjct: 126 VSPNMRGILVDWLVEVAEEYKIVSDTLYLTVSYIDRFLSFNVLNRQRLQLLGVSAMLIAS 185

Query: 554 KYEEITPPHTEDFCYITDNTYTKQEVVKMEAEVLKTLKFEMG 679
           KYEEI PP+ EDFCYITDNTYTK+EVVKMEA++LK+LKFE+G
Sbjct: 186 KYEEINPPNVEDFCYITDNTYTKEEVVKMEADILKSLKFEVG 227


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