BLASTX nr result

ID: Atractylodes21_contig00046211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046211
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]    70   3e-20
emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]    70   1e-18
gb|AFS30556.1| reverse transcriptase, partial [Petunia x hybrida]      77   7e-17
gb|AFS30559.1| reverse transcriptase, partial [Petunia x hybrida]      76   2e-16
emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]    64   7e-16

>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score = 69.7 bits (169), Expect(3) = 3e-20
 Identities = 31/54 (57%), Positives = 40/54 (74%)
 Frame = +2

Query: 26   FFMKKLDREIYMEQPKGYERKSNSRHVCKLKKTLNGLKQAPRAWYDEIAGFLLE 187
            F   +LDREIYM QP G++ + +  +VCKL+K L GLKQAPRAWY +IA FL +
Sbjct: 898  FLHGELDREIYMNQPMGFQSQGHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTQ 951



 Score = 47.4 bits (111), Expect(3) = 3e-20
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = +3

Query: 186  SGYAMVPTDSSLFVKVVEGKLAIMVVYDDDLIVS 287
            SGY++ P DSSLFVK   GKLAI++VY DDLI++
Sbjct: 952  SGYSVTPADSSLFVKANGGKLAIVLVYVDDLIIT 985



 Score = 26.2 bits (56), Expect(3) = 3e-20
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +1

Query: 4   QMDVKNAFLHEE 39
           QMDVKNAFLH E
Sbjct: 891 QMDVKNAFLHGE 902


>emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]
          Length = 1161

 Score = 70.5 bits (171), Expect(3) = 1e-18
 Identities = 31/54 (57%), Positives = 41/54 (75%)
 Frame = +2

Query: 26   FFMKKLDREIYMEQPKGYERKSNSRHVCKLKKTLNGLKQAPRAWYDEIAGFLLE 187
            F   +LDREIYM QP G++ + + ++VCKL+K L GLKQAPRAWY +IA FL +
Sbjct: 843  FLHGELDREIYMNQPMGFQSQGHPKYVCKLRKALYGLKQAPRAWYGKIAEFLTQ 896



 Score = 38.9 bits (89), Expect(3) = 1e-18
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = +3

Query: 186 SGYAMVPTDSSLFVKVVEGKLAIMVVYDD 272
           SGY++ P DSSLFVK   GKLAI++ Y++
Sbjct: 897 SGYSITPADSSLFVKANGGKLAIVLAYEN 925



 Score = 28.1 bits (61), Expect(3) = 1e-18
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 1   RQMDVKNAFLHEE 39
           RQMDVKNAFLH E
Sbjct: 835 RQMDVKNAFLHGE 847


>gb|AFS30556.1| reverse transcriptase, partial [Petunia x hybrida]
          Length = 87

 Score = 77.4 bits (189), Expect(2) = 7e-17
 Identities = 35/54 (64%), Positives = 43/54 (79%)
 Frame = +2

Query: 26  FFMKKLDREIYMEQPKGYERKSNSRHVCKLKKTLNGLKQAPRAWYDEIAGFLLE 187
           FF  +LDREIYM+QP+G+  K N  +VCKLKK L GLKQAPRAWY +IA FL++
Sbjct: 3   FFHGELDREIYMDQPQGFVNKDNPDYVCKLKKALYGLKQAPRAWYGKIAEFLIQ 56



 Score = 34.7 bits (78), Expect(2) = 7e-17
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +3

Query: 186 SGYAMVPTDSSLFVKVVEGKLAIMVVYDDDL 278
           SGY +   DSSLFVK    +L+I++VY DD+
Sbjct: 57  SGYQVAHADSSLFVKARGARLSIILVYVDDM 87


>gb|AFS30559.1| reverse transcriptase, partial [Petunia x hybrida]
          Length = 87

 Score = 75.9 bits (185), Expect(2) = 2e-16
 Identities = 34/54 (62%), Positives = 43/54 (79%)
 Frame = +2

Query: 26  FFMKKLDREIYMEQPKGYERKSNSRHVCKLKKTLNGLKQAPRAWYDEIAGFLLE 187
           FF  +LDREIYM+QP+G+  + N  +VCKLKK L GLKQAPRAWY +IA FL++
Sbjct: 3   FFHGELDREIYMDQPQGFVNRDNPDYVCKLKKALYGLKQAPRAWYGKIAEFLVQ 56



 Score = 34.7 bits (78), Expect(2) = 2e-16
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +3

Query: 186 SGYAMVPTDSSLFVKVVEGKLAIMVVYDDDL 278
           SGY +   DSSLFVK    +L+I++VY DD+
Sbjct: 57  SGYQVAHADSSLFVKARGARLSIILVYVDDM 87


>emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]
          Length = 973

 Score = 64.3 bits (155), Expect(3) = 7e-16
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = +2

Query: 26  FFMKKLDREIYMEQPKGYERKSNSRHVCKLKKTLNGLKQAPRAWYD 163
           F   +LDREIYM QP G+  + +  +VCKL+K L GLKQAPRAWYD
Sbjct: 588 FLHGELDREIYMNQPXGFXSQGHPEYVCKLRKALYGLKQAPRAWYD 633



 Score = 37.7 bits (86), Expect(3) = 7e-16
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +3

Query: 210 DSSLFVKVVEGKLAIMVVYDDDLIVSR 290
           DSSLFVK   GKL I++VY DDLI++R
Sbjct: 633 DSSLFVKANGGKLVIVLVYVDDLIITR 659



 Score = 26.2 bits (56), Expect(3) = 7e-16
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +1

Query: 4   QMDVKNAFLHEE 39
           QMDVKNAFLH E
Sbjct: 581 QMDVKNAFLHGE 592


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