BLASTX nr result

ID: Atractylodes21_contig00046145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046145
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629173.1| Polynucleotidyl transferase [Medicago trunca...   114   6e-24
ref|XP_003637168.1| Polynucleotidyl transferase [Medicago trunca...    97   1e-18
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    92   3e-17
ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana] ...    92   4e-17
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...    87   1e-15

>ref|XP_003629173.1| Polynucleotidyl transferase [Medicago truncatula]
           gi|355523195|gb|AET03649.1| Polynucleotidyl transferase
           [Medicago truncatula]
          Length = 169

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/142 (41%), Positives = 87/142 (61%)
 Frame = +1

Query: 7   MTGSDDNTQGPKASFHPAFGVNNIKNSIPLLLDQGDGHYASWVELFYIHTCAYNVLDHID 186
           MT +  ++   K  FHPAF V+NIKN I ++L+     Y +W ELF I   ++ VL H  
Sbjct: 26  MTHTSSSSTYSKTKFHPAFAVSNIKNHIHIVLEMEKDQYGTWAELFRILARSHRVLHHGV 85

Query: 187 PTAARPTDIDQATWTRLDAVVKQWIYATISTDLLQTIMKPGASAQDLWNRLEEIFQDNKA 366
           P+    T  D ++W          IY+TISTDLL TI++P ++A + WNRL +IFQDN+ 
Sbjct: 86  PSKDNTTPRDTSSW----------IYSTISTDLLTTILEPNSTAVETWNRLTDIFQDNQN 135

Query: 367 THAVYLEEQFNPSRLNAFSNIS 432
             AV LE++F+ +R++ F N+S
Sbjct: 136 ARAVTLEQEFSNTRMDDFPNVS 157


>ref|XP_003637168.1| Polynucleotidyl transferase [Medicago truncatula]
           gi|355503103|gb|AES84306.1| Polynucleotidyl transferase
           [Medicago truncatula]
          Length = 239

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 56/141 (39%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
 Frame = +1

Query: 25  NTQGPKASFHPAFGVNNIKNSIPLLLDQGDGHYASWVELFYIHTCAYNVLDHIDPTA--A 198
           ++ G K  FHPAF                        ELF I   ++ VL HI P+    
Sbjct: 6   SSTGFKTKFHPAFA-----------------------ELFRIQARSHRVLHHIVPSKDNT 42

Query: 199 RPTDIDQAT---WTRLDAVVKQWIYATISTDLLQTIMKPGASAQDLWNRLEEIFQDNKAT 369
            PTD   A    WT LD+ V QWIY+TISTDLL TI++P ++  + WNR  +IFQDN+  
Sbjct: 43  TPTDTSSAEFEQWTTLDSTVLQWIYSTISTDLLTTILEPDSTTMEAWNRSSDIFQDNQNA 102

Query: 370 HAVYLEEQFNPSRLNAFSNIS 432
            AV LE++F+ +R+  F N+S
Sbjct: 103 RAVTLEQEFSNTRMEDFPNVS 123


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/119 (36%), Positives = 68/119 (57%)
 Frame = +1

Query: 37  PKASFHPAFGVNNIKNSIPLLLDQGDGHYASWVELFYIHTCAYNVLDHIDPTAARPTDID 216
           P +S    +G+  IK  IP+LLD  + +Y  W ELF  H  ++ VL H+D +     +I 
Sbjct: 4   PSSSNEKLYGITQIKAYIPILLDMANLYYNLWRELFETHCVSFGVLGHLDGSTKSTPEIA 63

Query: 217 QATWTRLDAVVKQWIYATISTDLLQTIMKPGASAQDLWNRLEEIFQDNKATHAVYLEEQ 393
           +  W   D  VK WIY TIS  ++ T++K  ++A++LW  +E +F DNK   A+ LE +
Sbjct: 64  KE-WKERDGHVKMWIYGTISESIIDTVLKKNSTARELWLAIETLFLDNKEARALQLENE 121


>ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177756|dbj|BAB11069.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008231|gb|AED95614.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 369

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/127 (37%), Positives = 72/127 (56%)
 Frame = +1

Query: 43  ASFHPAFGVNNIKNSIPLLLDQGDGHYASWVELFYIHTCAYNVLDHIDPTAARPTDIDQA 222
           +S+  +FG+  I+  I + LD    +Y  W ELF     ++ VL HID ++  PT + + 
Sbjct: 7   SSYEKSFGIMQIRAYIFVTLDLNKLNYDVWRELFETLCLSFGVLGHIDGSST-PTPMTEK 65

Query: 223 TWTRLDAVVKQWIYATISTDLLQTIMKPGASAQDLWNRLEEIFQDNKATHAVYLEEQFNP 402
            W   D +VK WIY TI+  LL TI+K G +A+DLW  LE +F+DNK   A+  E +   
Sbjct: 66  RWKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRT 125

Query: 403 SRLNAFS 423
           + ++  S
Sbjct: 126 TTIDDLS 132


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/117 (33%), Positives = 70/117 (59%)
 Frame = +1

Query: 61  FGVNNIKNSIPLLLDQGDGHYASWVELFYIHTCAYNVLDHIDPTAARPTDIDQATWTRLD 240
           +GV+NIK+ IP++LD  + +Y +W ELF  H  +++VL HID T  +P +     W + D
Sbjct: 11  YGVSNIKSHIPVILDIEESNYDAWRELFLTHCLSFDVLGHIDGT-LQPANAADVNWQKRD 69

Query: 241 AVVKQWIYATISTDLLQTIMKPGASAQDLWNRLEEIFQDNKATHAVYLEEQFNPSRL 411
            +VK W+Y T++    Q     G++++++W R+E  F++NK   A+ L+ +     +
Sbjct: 70  GIVKLWLYGTLTPKQFQGSFVFGSTSREIWLRIENQFRNNKDARALRLDNELRTKEI 126


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