BLASTX nr result

ID: Atractylodes21_contig00046114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046114
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   184   5e-45
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              184   5e-45
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   177   6e-43
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...   168   5e-40
ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39

>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  184 bits (468), Expect = 5e-45
 Identities = 87/110 (79%), Positives = 100/110 (90%)
 Frame = +2

Query: 2   EGVRPNEITFICILNACSRMGLVEEGLRVFESMTDVYGIEPSVQHYGCLVDLLGGAGMLE 181
           EGV PNE+TFIC+L+ACSR+GLVEEGLR+F+SMT++YGIEP VQHYGCLVDLLG AGMLE
Sbjct: 340 EGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLE 399

Query: 182 QANKVVTEMPMEPDSYVLGALLNACRVHGNVELGRETVEGLADRGLDRSG 331
            A +VV EMP+EPDSYVLGALLNACRVHG+VELG+ETVE LA+R LD  G
Sbjct: 400 DAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGG 449


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  184 bits (468), Expect = 5e-45
 Identities = 87/110 (79%), Positives = 100/110 (90%)
 Frame = +2

Query: 2   EGVRPNEITFICILNACSRMGLVEEGLRVFESMTDVYGIEPSVQHYGCLVDLLGGAGMLE 181
           EGV PNE+TFIC+L+ACSR+GLVEEGLR+F+SMT++YGIEP VQHYGCLVDLLG AGMLE
Sbjct: 315 EGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLE 374

Query: 182 QANKVVTEMPMEPDSYVLGALLNACRVHGNVELGRETVEGLADRGLDRSG 331
            A +VV EMP+EPDSYVLGALLNACRVHG+VELG+ETVE LA+R LD  G
Sbjct: 375 DAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGG 424


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/110 (74%), Positives = 97/110 (88%)
 Frame = +2

Query: 2   EGVRPNEITFICILNACSRMGLVEEGLRVFESMTDVYGIEPSVQHYGCLVDLLGGAGMLE 181
           E V PNE+TFIC+L+ACSRMGLV+EGLR+F  M+ VYGIEP VQHYGC+VDLLG AG+LE
Sbjct: 335 EKVIPNEVTFICVLSACSRMGLVDEGLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLE 394

Query: 182 QANKVVTEMPMEPDSYVLGALLNACRVHGNVELGRETVEGLADRGLDRSG 331
           +A ++V EMPMEPDSYVLGALLN+CRVHG+VELG+ETVE L +RGLD  G
Sbjct: 395 EAKRLVREMPMEPDSYVLGALLNSCRVHGDVELGKETVESLVERGLDHGG 444


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  168 bits (425), Expect = 5e-40
 Identities = 80/110 (72%), Positives = 94/110 (85%)
 Frame = +2

Query: 2   EGVRPNEITFICILNACSRMGLVEEGLRVFESMTDVYGIEPSVQHYGCLVDLLGGAGMLE 181
           EGV PNE+TF+ +LNACSRMGLV++GLR+FE+M+ +YG EP VQHYGCLVDLLG AG LE
Sbjct: 338 EGVVPNEVTFVSVLNACSRMGLVDKGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLE 397

Query: 182 QANKVVTEMPMEPDSYVLGALLNACRVHGNVELGRETVEGLADRGLDRSG 331
           +A K+V EMPM+PDSYVLGALLNA RV+G+VELG ETVE LA   LD SG
Sbjct: 398 EAKKLVKEMPMKPDSYVLGALLNASRVYGDVELGEETVESLAQLSLDHSG 447


>ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|222836014|gb|EEE74435.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  166 bits (419), Expect = 2e-39
 Identities = 75/110 (68%), Positives = 93/110 (84%)
 Frame = +2

Query: 2   EGVRPNEITFICILNACSRMGLVEEGLRVFESMTDVYGIEPSVQHYGCLVDLLGGAGMLE 181
           EGV PNE+TF+C+LNACSRMG+V+EGLR+FESM++ Y IEP +QHYGCLVDLLG AG +E
Sbjct: 339 EGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIE 398

Query: 182 QANKVVTEMPMEPDSYVLGALLNACRVHGNVELGRETVEGLADRGLDRSG 331
           +A +VV EMP++PDSY LGALL+ACRVHG+V+LG E V+ L  R LD  G
Sbjct: 399 EAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGEEMVDSLVQRCLDHGG 448


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