BLASTX nr result

ID: Atractylodes21_contig00046073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046073
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   101   5e-20
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]    99   3e-19
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    98   8e-19
ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855...    98   8e-19
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]    98   8e-19

>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  101 bits (252), Expect = 5e-20
 Identities = 49/95 (51%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
 Frame = +2

Query: 5    YCDSYWLGCPFTRRSRTGYLLLLGGSPISWTTKKQSVVXXXXXXXXXXXXT--VSEILWV 178
            YCDS W  CP TRRS + Y++LLGGSPISW TKKQ  V            +  + EI W+
Sbjct: 1346 YCDSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKEIKWL 1405

Query: 179  RWLLKDLQVHIATPTQLFCDNQAARHIANNPVYHE 283
            R LLK+L +  +TP +L+CD++AA HIA NPV+HE
Sbjct: 1406 RKLLKELGIEQSTPARLYCDSKAAIHIAANPVFHE 1440


>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
          Length = 1323

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/96 (52%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
 Frame = +2

Query: 2    AYCDSYWLGCPFTRRSRTGYLLLLGGSPISWTTKKQSVVXXXXXXXXXXXXT--VSEILW 175
            AYCDS W GCP TRRS TGY + LG S ISW +K+Q  V            T    E+ W
Sbjct: 1167 AYCDSDWAGCPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTW 1226

Query: 176  VRWLLKDLQVHIATPTQLFCDNQAARHIANNPVYHE 283
            +R+LLKDL V    P  L+CDN+AA HIA NPV+HE
Sbjct: 1227 LRYLLKDLGVLHKEPALLYCDNKAALHIAANPVFHE 1262


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/95 (51%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
 Frame = +2

Query: 5    YCDSYWLGCPFTRRSRTGYLLLLGGSPISWTTKKQSVVXXXXXXXXXXXXTVS--EILWV 178
            YCDS +  CP TRRS + Y++LLGGSPISW TKKQ  V            +V+  EI W+
Sbjct: 1336 YCDSDFQSCPLTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSVALKEIKWL 1395

Query: 179  RWLLKDLQVHIATPTQLFCDNQAARHIANNPVYHE 283
              LLK+L + +A PT+LFCD++AA  IA NPV+HE
Sbjct: 1396 NKLLKELGITLAAPTRLFCDSKAAISIAANPVFHE 1430


>ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855226 [Vitis vinifera]
          Length = 1011

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/96 (52%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
 Frame = +2

Query: 2    AYCDSYWLGCPFTRRSRTGYLLLLGGSPISWTTKKQSVVXXXXXXXXXXXX--TVSEILW 175
            AYCD+ W  C  TRRS TGY +  G +PISW TKKQ  V              T  EI W
Sbjct: 849  AYCDADWARCKDTRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITW 908

Query: 176  VRWLLKDLQVHIATPTQLFCDNQAARHIANNPVYHE 283
            +R LL DL V+ A   +LFCDNQAA HIA+NPV+HE
Sbjct: 909  LRSLLADLNVNHAHAVKLFCDNQAAIHIASNPVFHE 944


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/96 (52%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
 Frame = +2

Query: 2    AYCDSYWLGCPFTRRSRTGYLLLLGGSPISWTTKKQSVVXXXXXXXXXXXX--TVSEILW 175
            AYCD+ W  C  TRRS TGY +  G +PISW TKKQ  V              T  EI W
Sbjct: 1322 AYCDADWARCKDTRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITW 1381

Query: 176  VRWLLKDLQVHIATPTQLFCDNQAARHIANNPVYHE 283
            +R LL DL V+ A   +LFCDNQAA HIA+NPV+HE
Sbjct: 1382 LRSLLADLNVNHAHAVKLFCDNQAAIHIASNPVFHE 1417


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