BLASTX nr result

ID: Atractylodes21_contig00046027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046027
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein A...    75   5e-12
ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr...    75   5e-12
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/88 (42%), Positives = 49/88 (55%)
 Frame = +1

Query: 13  SVSAVWRCLRPESEKVPWSRIVWFNHNIPKISFTLWLAVQKSLPTQDKIILWKHHPPDLL 192
           SV   W  LR   + V W  IVWF + +P+ SF LW+AVQ+ L TQDK+  +  H P+  
Sbjct: 325 SVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPN-R 383

Query: 193 CS*CKLGPDSHRHLFFSFLFAAQIWGDL 276
           CS C    + H HLFF   +   IW D+
Sbjct: 384 CSLCLRNNEDHNHLFFECSYTKAIWWDV 411


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/87 (41%), Positives = 48/87 (55%)
 Frame = +1

Query: 16   VSAVWRCLRPESEKVPWSRIVWFNHNIPKISFTLWLAVQKSLPTQDKIILWKHHPPDLLC 195
            V   W  LR   + V W  IVWF + +P+ SF LW+AVQ+ L TQDK+  +  H P+  C
Sbjct: 1199 VKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPN-RC 1257

Query: 196  S*CKLGPDSHRHLFFSFLFAAQIWGDL 276
            S C    + H HLFF   +   IW D+
Sbjct: 1258 SLCLRNNEDHNHLFFECSYTKAIWWDV 1284


>ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 342

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 37/97 (38%), Positives = 55/97 (56%)
 Frame = +1

Query: 7   SVSVSAVWRCLRPESEKVPWSRIVWFNHNIPKISFTLWLAVQKSLPTQDKIILWKHHPPD 186
           S S+++ W  +RP S +V WS ++W   NIPK SF  WLA++  L T+D++  W    P 
Sbjct: 180 SFSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRLSTRDRLSRWDRSIP- 238

Query: 187 LLCS*CKLGPDSHRHLFFSFLFAAQIWGDLTFMICHL 297
           L C  C    +S  HLFF  +   + +G  +F +CHL
Sbjct: 239 LSCLLCGGNYESRNHLFFLVILGGR-FGRGSFCLCHL 274


>ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis
           thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 209

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 34/84 (40%), Positives = 49/84 (58%)
 Frame = +1

Query: 13  SVSAVWRCLRPESEKVPWSRIVWFNHNIPKISFTLWLAVQKSLPTQDKIILWKHHPPDLL 192
           S +A W  L P  EKV W + +WF   IPK +F  W+ ++  LPT+DK++ W  H P  L
Sbjct: 127 SSAATWIHLNPVGEKVDWHKAIWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPS-L 185

Query: 193 CS*CKLGPDSHRHLFFSFLFAAQI 264
           C  C    ++ +HLFF  +FA +I
Sbjct: 186 CLLCNAFDETRQHLFFDCVFAGEI 209


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/88 (40%), Positives = 48/88 (54%)
 Frame = +1

Query: 13   SVSAVWRCLRPESEKVPWSRIVWFNHNIPKISFTLWLAVQKSLPTQDKIILWKHHPPDLL 192
            SV   W  LR   + V W  IVWF + +P+ SF LW+ VQ+ L TQDK+  +  H P+  
Sbjct: 858  SVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPN-R 916

Query: 193  CS*CKLGPDSHRHLFFSFLFAAQIWGDL 276
            CS C    + H HLFF   +   IW D+
Sbjct: 917  CSLCLRNNEDHNHLFFECSYTKAIWWDV 944


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