BLASTX nr result

ID: Atractylodes21_contig00046002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046002
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum]                  137   7e-31
ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thali...   132   2e-29
ref|XP_002306993.1| predicted protein [Populus trichocarpa] gi|2...   130   8e-29
ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...   130   8e-29
gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis th...   130   1e-28

>gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum]
          Length = 197

 Score =  137 bits (346), Expect = 7e-31
 Identities = 76/164 (46%), Positives = 99/164 (60%), Gaps = 16/164 (9%)
 Frame = +3

Query: 24  IVIAVILCFILSLLVLNVVARCSWIRWFPNTVITSRIDHFSLPA-----AKLLRRIPKLT 188
           +V+A +LC ++ +L L  VARC+WIR    + I       S PA      K+L+ +PK  
Sbjct: 37  VVLAALLCALICVLGLVAVARCNWIRRISGS-IAGNSAFASAPANKGLKKKVLKSLPKFN 95

Query: 189 YTTESMADKFSDCAICLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLLK 368
           Y  E  ADKFS+CAICL EF VG+EIRVLP+CGH FHV CID W+GSH +CPSCR +L+ 
Sbjct: 96  YGAEH-ADKFSECAICLAEFAVGEEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRSILV- 153

Query: 369 TTRCNRC-----------EDSAVAGVTGIQSPITGETSVNSFLP 467
            TRC++C             SA A   G +S +     VN+FLP
Sbjct: 154 VTRCHKCGELPVASSSSSSSSAAATGAGTESRLPRNYHVNAFLP 197


>ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thaliana]
           gi|68565308|sp|Q9LM69.1|ATL80_ARATH RecName:
           Full=RING-H2 finger protein ATL80
           gi|8886938|gb|AAF80624.1|AC069251_17 F2D10.34
           [Arabidopsis thaliana] gi|15027985|gb|AAK76523.1|
           unknown protein [Arabidopsis thaliana]
           gi|332191907|gb|AEE30028.1| RING-H2 finger protein ATL80
           [Arabidopsis thaliana]
          Length = 197

 Score =  132 bits (333), Expect = 2e-29
 Identities = 72/169 (42%), Positives = 103/169 (60%), Gaps = 19/169 (11%)
 Frame = +3

Query: 18  LFIVIAVILCFILSLLVLNVVARCSWIRWFP---NTVITSRIDHFSLPAA--------KL 164
           L +++A +LC ++ +L L  V+RC W+R       TV  S+      P A        K+
Sbjct: 30  LVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAAANKGLKKKV 89

Query: 165 LRRIPKLTYTTESM-ADKFSDCAICLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTC 341
           L+ +PKLT++ ES  ++KF++CAICL EF  GDE+RVLP+CGH FHV CID W+GSH +C
Sbjct: 90  LQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSC 149

Query: 342 PSCRQMLLKTTRCNRCEDSAVAGVTGIQSP-------ITGETSVNSFLP 467
           PSCRQ+L+   RC++C     +  +G++S          GE   NSFLP
Sbjct: 150 PSCRQILV-VARCHKCGGLPGSSSSGLESEPEIEIRIKQGEDDPNSFLP 197


>ref|XP_002306993.1| predicted protein [Populus trichocarpa] gi|222856442|gb|EEE93989.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  130 bits (328), Expect = 8e-29
 Identities = 72/162 (44%), Positives = 98/162 (60%), Gaps = 14/162 (8%)
 Frame = +3

Query: 24  IVIAVILCFILSLLVLNVVARCSWIRWFPNTVITSRIDHFSLPAA------KLLRRIPKL 185
           +++A +LC ++ +L L  VARC+W+R   +      +       A      K LR +PK 
Sbjct: 2   VILAALLCALICVLGLIAVARCAWLRRLSSHTPAPPVPLPPPSVANKGLKKKTLRSLPKQ 61

Query: 186 TYTTESMADKFSDCAICLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLL 365
           T++ +S A KFSDCAICLTEF VGDEIRVLP+CGH FHV CID W+GSH +CPSCRQ+L+
Sbjct: 62  TFSEDS-AGKFSDCAICLTEFSVGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILM 120

Query: 366 KTTRCNRC-----EDSAVAGVTGIQSPI---TGETSVNSFLP 467
              RC +C       S+++G  G ++       E   N FLP
Sbjct: 121 -VDRCQKCGGLPSGSSSISGGGGAETEAGLKECEDDANRFLP 161


>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
          Length = 184

 Score =  130 bits (328), Expect = 8e-29
 Identities = 72/157 (45%), Positives = 95/157 (60%), Gaps = 9/157 (5%)
 Frame = +3

Query: 24  IVIAVILCFILSLLVLNVVARCSWIRWFPNTVITSRIDHFSLPA-----AKLLRRIPKLT 188
           +++A +LC ++ +L L  VARC+W+R                PA      K+LR +PK+T
Sbjct: 30  VILAALLCALICVLGLVAVARCAWLRRISGAANLPGGSAPQTPANKGLKKKILRSLPKVT 89

Query: 189 YTTESMADKFSDCAICLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLLK 368
           Y  E+ A   +DCAICLTEFV GDEIRVLP+CGH FHV CID W+GSH +CPSCRQ+L+ 
Sbjct: 90  YAAET-AGNLTDCAICLTEFVGGDEIRVLPQCGHGFHVGCIDTWLGSHCSCPSCRQILV- 147

Query: 369 TTRCNRCED-SAVAGVTGIQSPI---TGETSVNSFLP 467
             RC +C    A +  TG ++       E  VN FLP
Sbjct: 148 VARCQKCGGVPASSSSTGAETESRLKEREDDVNRFLP 184


>gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 186

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/131 (48%), Positives = 91/131 (69%), Gaps = 7/131 (5%)
 Frame = +3

Query: 18  LFIVIAVILCFILSLLVLNVVARCSWIRWFPNTVITSRIDHFSLPAA------KLLRRIP 179
           L +++AV+LC +  ++ L  V+RC+W+R   +   + +     + AA      K+LR +P
Sbjct: 28  LVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLP 87

Query: 180 KLTYTTESM-ADKFSDCAICLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQ 356
           KLTY+ +S  A+K  +CAICLTEF  GDE+RVLP+CGH FHV CID W+GSH +CPSCRQ
Sbjct: 88  KLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQ 147

Query: 357 MLLKTTRCNRC 389
           +L+  TRC++C
Sbjct: 148 ILV-VTRCHKC 157


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