BLASTX nr result
ID: Atractylodes21_contig00046002
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00046002 (505 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum] 137 7e-31 ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thali... 132 2e-29 ref|XP_002306993.1| predicted protein [Populus trichocarpa] gi|2... 130 8e-29 ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit... 130 8e-29 gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis th... 130 1e-28 >gb|ADI71977.1| E3 ubiquitin ligase [Capsicum annuum] Length = 197 Score = 137 bits (346), Expect = 7e-31 Identities = 76/164 (46%), Positives = 99/164 (60%), Gaps = 16/164 (9%) Frame = +3 Query: 24 IVIAVILCFILSLLVLNVVARCSWIRWFPNTVITSRIDHFSLPA-----AKLLRRIPKLT 188 +V+A +LC ++ +L L VARC+WIR + I S PA K+L+ +PK Sbjct: 37 VVLAALLCALICVLGLVAVARCNWIRRISGS-IAGNSAFASAPANKGLKKKVLKSLPKFN 95 Query: 189 YTTESMADKFSDCAICLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLLK 368 Y E ADKFS+CAICL EF VG+EIRVLP+CGH FHV CID W+GSH +CPSCR +L+ Sbjct: 96 YGAEH-ADKFSECAICLAEFAVGEEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRSILV- 153 Query: 369 TTRCNRC-----------EDSAVAGVTGIQSPITGETSVNSFLP 467 TRC++C SA A G +S + VN+FLP Sbjct: 154 VTRCHKCGELPVASSSSSSSSAAATGAGTESRLPRNYHVNAFLP 197 >ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thaliana] gi|68565308|sp|Q9LM69.1|ATL80_ARATH RecName: Full=RING-H2 finger protein ATL80 gi|8886938|gb|AAF80624.1|AC069251_17 F2D10.34 [Arabidopsis thaliana] gi|15027985|gb|AAK76523.1| unknown protein [Arabidopsis thaliana] gi|332191907|gb|AEE30028.1| RING-H2 finger protein ATL80 [Arabidopsis thaliana] Length = 197 Score = 132 bits (333), Expect = 2e-29 Identities = 72/169 (42%), Positives = 103/169 (60%), Gaps = 19/169 (11%) Frame = +3 Query: 18 LFIVIAVILCFILSLLVLNVVARCSWIRWFP---NTVITSRIDHFSLPAA--------KL 164 L +++A +LC ++ +L L V+RC W+R TV S+ P A K+ Sbjct: 30 LVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAAANKGLKKKV 89 Query: 165 LRRIPKLTYTTESM-ADKFSDCAICLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTC 341 L+ +PKLT++ ES ++KF++CAICL EF GDE+RVLP+CGH FHV CID W+GSH +C Sbjct: 90 LQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSC 149 Query: 342 PSCRQMLLKTTRCNRCEDSAVAGVTGIQSP-------ITGETSVNSFLP 467 PSCRQ+L+ RC++C + +G++S GE NSFLP Sbjct: 150 PSCRQILV-VARCHKCGGLPGSSSSGLESEPEIEIRIKQGEDDPNSFLP 197 >ref|XP_002306993.1| predicted protein [Populus trichocarpa] gi|222856442|gb|EEE93989.1| predicted protein [Populus trichocarpa] Length = 161 Score = 130 bits (328), Expect = 8e-29 Identities = 72/162 (44%), Positives = 98/162 (60%), Gaps = 14/162 (8%) Frame = +3 Query: 24 IVIAVILCFILSLLVLNVVARCSWIRWFPNTVITSRIDHFSLPAA------KLLRRIPKL 185 +++A +LC ++ +L L VARC+W+R + + A K LR +PK Sbjct: 2 VILAALLCALICVLGLIAVARCAWLRRLSSHTPAPPVPLPPPSVANKGLKKKTLRSLPKQ 61 Query: 186 TYTTESMADKFSDCAICLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLL 365 T++ +S A KFSDCAICLTEF VGDEIRVLP+CGH FHV CID W+GSH +CPSCRQ+L+ Sbjct: 62 TFSEDS-AGKFSDCAICLTEFSVGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILM 120 Query: 366 KTTRCNRC-----EDSAVAGVTGIQSPI---TGETSVNSFLP 467 RC +C S+++G G ++ E N FLP Sbjct: 121 -VDRCQKCGGLPSGSSSISGGGGAETEAGLKECEDDANRFLP 161 >ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera] Length = 184 Score = 130 bits (328), Expect = 8e-29 Identities = 72/157 (45%), Positives = 95/157 (60%), Gaps = 9/157 (5%) Frame = +3 Query: 24 IVIAVILCFILSLLVLNVVARCSWIRWFPNTVITSRIDHFSLPA-----AKLLRRIPKLT 188 +++A +LC ++ +L L VARC+W+R PA K+LR +PK+T Sbjct: 30 VILAALLCALICVLGLVAVARCAWLRRISGAANLPGGSAPQTPANKGLKKKILRSLPKVT 89 Query: 189 YTTESMADKFSDCAICLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQMLLK 368 Y E+ A +DCAICLTEFV GDEIRVLP+CGH FHV CID W+GSH +CPSCRQ+L+ Sbjct: 90 YAAET-AGNLTDCAICLTEFVGGDEIRVLPQCGHGFHVGCIDTWLGSHCSCPSCRQILV- 147 Query: 369 TTRCNRCED-SAVAGVTGIQSPI---TGETSVNSFLP 467 RC +C A + TG ++ E VN FLP Sbjct: 148 VARCQKCGGVPASSSSTGAETESRLKEREDDVNRFLP 184 >gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis thaliana] Length = 186 Score = 130 bits (326), Expect = 1e-28 Identities = 63/131 (48%), Positives = 91/131 (69%), Gaps = 7/131 (5%) Frame = +3 Query: 18 LFIVIAVILCFILSLLVLNVVARCSWIRWFPNTVITSRIDHFSLPAA------KLLRRIP 179 L +++AV+LC + ++ L V+RC+W+R + + + + AA K+LR +P Sbjct: 28 LVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLP 87 Query: 180 KLTYTTESM-ADKFSDCAICLTEFVVGDEIRVLPRCGHCFHVVCIDRWIGSHFTCPSCRQ 356 KLTY+ +S A+K +CAICLTEF GDE+RVLP+CGH FHV CID W+GSH +CPSCRQ Sbjct: 88 KLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQ 147 Query: 357 MLLKTTRCNRC 389 +L+ TRC++C Sbjct: 148 ILV-VTRCHKC 157