BLASTX nr result

ID: Atractylodes21_contig00045957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045957
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329788.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
emb|CBI30588.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002509455.1| late embryogenesis abundant, putative [Ricin...    55   8e-06

>ref|XP_002329788.1| predicted protein [Populus trichocarpa] gi|222870850|gb|EEF07981.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
 Frame = -3

Query: 292 MASMNFARTSIVNVSKANVPGFTSSFPH---KFNRVCFTS-ASKHSQRKHAIEE-----T 140
           MA++  A+ +++N+SKA +P   S FP+   K +RVCFT+ ASK+++ ++A EE     +
Sbjct: 1   MAAIIIAKNAMLNLSKALIPQPPSLFPNSTPKVSRVCFTTYASKYNEGRYAAEEDEDRAS 60

Query: 139 NIGHNVDKAIKYTGDKSSEMERDAKNVMKEGNERVEEGVTEMKDKA 2
                  +    T D++ E    AK   KE  E+V+    EMK+KA
Sbjct: 61  GFSERAKETANETIDRTKERAEKAKERSKEMKEKVKGNAEEMKEKA 106


>emb|CBI30588.3| unnamed protein product [Vitis vinifera]
          Length = 270

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
 Frame = -3

Query: 292 MASMNFARTSIVNVSKANVPGFTSSF--PHKFNRVCFTSASKHSQRKHAIEET-NIGHNV 122
           MA+M  AR +++N+S+A     + +   P K +RVCFTSASK S+ ++A EE    G N+
Sbjct: 1   MATMFIARNTMLNLSRAFPRNRSIALRSPRKVSRVCFTSASKSSEGRNAAEEARENGSNM 60

Query: 121 DKAIKYTGDKSSEMERDAKNVMKEGNERVEEGVTEMKDKA 2
           +        ++SEM   AK   +E  +R +E   E+KD+A
Sbjct: 61  E-------GRASEMTEKAKEKTRESMDRTKEQAEEVKDRA 93


>ref|XP_002509455.1| late embryogenesis abundant, putative [Ricinus communis]
           gi|223549354|gb|EEF50842.1| late embryogenesis abundant,
           putative [Ricinus communis]
          Length = 265

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
 Frame = -3

Query: 292 MASMNFARTSIVNVSKA--NVPGFTSSFPHKFNRVCFTSASKHSQRKHAIEETNIGHNVD 119
           MA+ +  ++ I+ +SK   + P      PHK +RVCF SASKH++ ++A E+ +      
Sbjct: 1   MAAFSITKSVILTLSKTFPHPPSLFPGSPHKVSRVCFASASKHNKDRNAEEDKDFTDVAR 60

Query: 118 KAIKYTGDKSSEMERDAKNVMKEGNERVEEGVTEMKDKA 2
           +  K   +++      A+   KE  E+ +E   EMK+KA
Sbjct: 61  ETTKEGVERARVRAEQAREQSKEMKEQAKERAEEMKEKA 99


Top