BLASTX nr result

ID: Atractylodes21_contig00045892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045892
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   206   2e-51
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   203   1e-50
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   201   7e-50
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...   200   9e-50
ref|XP_003560991.1| PREDICTED: ABC transporter C family member 1...   199   2e-49

>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  206 bits (523), Expect = 2e-51
 Identities = 97/151 (64%), Positives = 119/151 (78%)
 Frame = +3

Query: 3    EPPTFAVANKNPHWRAAMTEEFKALMRNGTWTLVPPVPNANIVDCKWVYRLKRDEHGNIK 182
            EP + + A  +P WRAAM  EF+AL +N TWTLVPP    N++DCKWV+++K +  G+I 
Sbjct: 924  EPSSVSEALADPQWRAAMEAEFQALQKNNTWTLVPPDRTRNLIDCKWVFKVKYNADGSID 983

Query: 183  RYKARLVTKGFNQQQGIDYHDTFSPVVKSTTVRVVLSLAVSRKWPLRQLDVQNAFLHGDL 362
            R KARLV KGF QQ GIDY DTFSPVVK +T+R+VLSLAVS+KW LRQLDVQNAFLHG L
Sbjct: 984  RLKARLVAKGFKQQYGIDYDDTFSPVVKHSTIRLVLSLAVSQKWSLRQLDVQNAFLHGIL 1043

Query: 363  KETVYLRQPPGFIDSQKPDHLCLLHKSLYGL 455
            +ETVY++QPPGF D+  P++ C L KSLYGL
Sbjct: 1044 EETVYMKQPPGFADTTHPNYHCHLQKSLYGL 1074


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  203 bits (516), Expect = 1e-50
 Identities = 91/150 (60%), Positives = 118/150 (78%)
 Frame = +3

Query: 6    PPTFAVANKNPHWRAAMTEEFKALMRNGTWTLVPPVPNANIVDCKWVYRLKRDEHGNIKR 185
            P + + A K+ +WR AM++E+ AL+RNGTW LVPP    N+V CKW++R+KR+  G+I R
Sbjct: 846  PTSISQALKDQNWRQAMSDEYDALVRNGTWELVPPEDITNLVGCKWIFRIKRNSDGSIDR 905

Query: 186  YKARLVTKGFNQQQGIDYHDTFSPVVKSTTVRVVLSLAVSRKWPLRQLDVQNAFLHGDLK 365
            YKARLV KGF+Q+ G+DYH+TFSPVVK TTVR+VLS+AVS  W LRQLDV NAFL G L 
Sbjct: 906  YKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSIAVSNGWSLRQLDVNNAFLQGRLS 965

Query: 366  ETVYLRQPPGFIDSQKPDHLCLLHKSLYGL 455
            E V++ QPPGF+DS  P ++C LHK++YGL
Sbjct: 966  ENVFMAQPPGFVDSDHPSYVCKLHKAIYGL 995


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  201 bits (510), Expect = 7e-50
 Identities = 93/151 (61%), Positives = 112/151 (74%)
 Frame = +3

Query: 3    EPPTFAVANKNPHWRAAMTEEFKALMRNGTWTLVPPVPNANIVDCKWVYRLKRDEHGNIK 182
            EP T + A K+P W A M +E  AL RN TW LVPP  N NIV CKWV+R+KR+  G+I 
Sbjct: 896  EPTTASQALKDPKWCAXMDDELAALARNCTWVLVPPPSNHNIVGCKWVFRIKRNPDGSIS 955

Query: 183  RYKARLVTKGFNQQQGIDYHDTFSPVVKSTTVRVVLSLAVSRKWPLRQLDVQNAFLHGDL 362
            RYKARLV KGF+Q+ G+DYHDTFSPVVK TT+RVVLS+A+S  W + QLDV N FLHG L
Sbjct: 956  RYKARLVAKGFHQRPGVDYHDTFSPVVKPTTIRVVLSIALSNXWXISQLDVNNXFLHGTL 1015

Query: 363  KETVYLRQPPGFIDSQKPDHLCLLHKSLYGL 455
             E VY+ QPPG++D   P H+C L K+LYGL
Sbjct: 1016 TEDVYMAQPPGYVDQANPTHVCRLQKALYGL 1046


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
            gi|31430072|gb|AAP52036.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1058

 Score =  200 bits (509), Expect = 9e-50
 Identities = 94/151 (62%), Positives = 115/151 (76%)
 Frame = +3

Query: 3    EPPTFAVANKNPHWRAAMTEEFKALMRNGTWTLVPPVPNANIVDCKWVYRLKRDEHGNIK 182
            EP     A KN HW+ AM +EF+AL+ N TW LVPP    NI+DCKWVY++KR    +I 
Sbjct: 573  EPGNLHEALKNKHWKLAMDKEFEALVHNKTWHLVPPQKGVNIIDCKWVYKVKRKADESID 632

Query: 183  RYKARLVTKGFNQQQGIDYHDTFSPVVKSTTVRVVLSLAVSRKWPLRQLDVQNAFLHGDL 362
            RYKARLV KGF Q+ GIDY DTFSP+VK+ T+R+VLSLAVS+ W LRQLDVQNAFLHG L
Sbjct: 633  RYKARLVAKGFKQRYGIDYEDTFSPIVKAATIRLVLSLAVSQGWSLRQLDVQNAFLHGFL 692

Query: 363  KETVYLRQPPGFIDSQKPDHLCLLHKSLYGL 455
            +E VY+RQPPG+ + + P +LC L K+LYGL
Sbjct: 693  EEDVYMRQPPGYEEPKAPQYLCKLDKALYGL 723


>ref|XP_003560991.1| PREDICTED: ABC transporter C family member 13-like [Brachypodium
           distachyon]
          Length = 2064

 Score =  199 bits (506), Expect = 2e-49
 Identities = 91/151 (60%), Positives = 112/151 (74%)
 Frame = +3

Query: 3   EPPTFAVANKNPHWRAAMTEEFKALMRNGTWTLVPPVPNANIVDCKWVYRLKRDEHGNIK 182
           EPP F  A  +PHWR AM  E+ A  +N TW LVPP    NI+DC+WV+++KR   G+I 
Sbjct: 478 EPPDFRAAILSPHWRTAMEAEYTAFQKNQTWRLVPPRSGVNIIDCRWVFKIKRRADGSID 537

Query: 183 RYKARLVTKGFNQQQGIDYHDTFSPVVKSTTVRVVLSLAVSRKWPLRQLDVQNAFLHGDL 362
           RYKARLV KGF Q+ G+DY DTFSPVVK TT+R++LS+A+S  W LRQLD+QNAFLHG L
Sbjct: 538 RYKARLVAKGFKQRYGLDYEDTFSPVVKPTTIRLLLSMALSHGWHLRQLDIQNAFLHGVL 597

Query: 363 KETVYLRQPPGFIDSQKPDHLCLLHKSLYGL 455
           +E V++RQP GF D   P HLC L K+LYGL
Sbjct: 598 EEEVFMRQPRGFEDPSHPRHLCQLEKALYGL 628


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