BLASTX nr result

ID: Atractylodes21_contig00045834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045834
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555303.1| PREDICTED: pre-mRNA-processing factor 40 hom...   132   3e-29
ref|XP_002300284.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_003535678.1| PREDICTED: pre-mRNA-processing factor 40 hom...   131   7e-29
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l...   130   1e-28
ref|XP_004156902.1| PREDICTED: pre-mRNA-processing protein 40A-l...   129   2e-28

>ref|XP_003555303.1| PREDICTED: pre-mRNA-processing factor 40 homolog A-like [Glycine
           max]
          Length = 1072

 Score =  132 bits (332), Expect = 3e-29
 Identities = 55/92 (59%), Positives = 74/92 (80%)
 Frame = -1

Query: 290 TMDAPKVVVKAPSVWIEHTARSGKRYYYNKKTKVSCWEKPLDLMSPIERADASTDWKELT 111
           T+  P++    P+ WIEHT+ +G+ +YYNKKTKVS WEKP +LM+PIER DA+T+WKE T
Sbjct: 210 TIAQPQLTKNGPTDWIEHTSATGRTFYYNKKTKVSSWEKPFELMTPIERVDATTNWKEYT 269

Query: 110 DPDGRKYYYNKFTRQSTWKMPDELKLARKRLK 15
            PDGRKYYYNK T +S W +P+ELKLAR++++
Sbjct: 270 SPDGRKYYYNKITNESKWSIPEELKLAREQVE 301


>ref|XP_002300284.1| predicted protein [Populus trichocarpa] gi|222847542|gb|EEE85089.1|
           predicted protein [Populus trichocarpa]
          Length = 972

 Score =  132 bits (332), Expect = 3e-29
 Identities = 57/92 (61%), Positives = 74/92 (80%)
 Frame = -1

Query: 278 PKVVVKAPSVWIEHTARSGKRYYYNKKTKVSCWEKPLDLMSPIERADASTDWKELTDPDG 99
           PK   +A + W EHT+ +G+R+YYNK+T+ S WEKP +L++PIERADASTDWKE   PDG
Sbjct: 194 PKPTEEALTEWKEHTSANGRRFYYNKRTRQSSWEKPYELLTPIERADASTDWKEFKSPDG 253

Query: 98  RKYYYNKFTRQSTWKMPDELKLARKRLKNEHT 3
           RKYYYNK T+QS W++P+ELKLAR R++N  T
Sbjct: 254 RKYYYNKVTKQSKWEIPEELKLARARVENTST 285


>ref|XP_003535678.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine
           max]
          Length = 1017

 Score =  131 bits (329), Expect = 7e-29
 Identities = 55/89 (61%), Positives = 71/89 (79%)
 Frame = -1

Query: 290 TMDAPKVVVKAPSVWIEHTARSGKRYYYNKKTKVSCWEKPLDLMSPIERADASTDWKELT 111
           T+  P++    P+ WIEHT+ +G+ +YYNKKTKVS WEKP +LM+PIER DA+T+WKE T
Sbjct: 210 TIAQPQLAKNGPTDWIEHTSATGRTFYYNKKTKVSSWEKPFELMTPIERVDATTNWKEYT 269

Query: 110 DPDGRKYYYNKFTRQSTWKMPDELKLARK 24
            PDGRKYYYNK T +S W +P+ELKLAR+
Sbjct: 270 SPDGRKYYYNKITNESKWSVPEELKLARE 298


>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 985

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/94 (62%), Positives = 72/94 (76%)
 Frame = -1

Query: 284 DAPKVVVKAPSVWIEHTARSGKRYYYNKKTKVSCWEKPLDLMSPIERADASTDWKELTDP 105
           +AP    +  S W EH +  G+RYYYNKKTK S WEKPL+LM+P+ERADAST WKE T P
Sbjct: 173 NAPVFNQQLSSDWQEHASADGRRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTAP 232

Query: 104 DGRKYYYNKFTRQSTWKMPDELKLARKRLKNEHT 3
           DGRKYYYNK T++S W MP+ELKLAR++ + E T
Sbjct: 233 DGRKYYYNKVTKESKWTMPEELKLAREQAQKEAT 266


>ref|XP_004156902.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 983

 Score =  129 bits (325), Expect = 2e-28
 Identities = 56/86 (65%), Positives = 70/86 (81%)
 Frame = -1

Query: 260 APSVWIEHTARSGKRYYYNKKTKVSCWEKPLDLMSPIERADASTDWKELTDPDGRKYYYN 81
           A S W EHT+  G+RYYYNKKTK+S WEKP +LM+ IERADAST+WKE T P+GRKYYYN
Sbjct: 215 ASSEWREHTSPDGRRYYYNKKTKISSWEKPFELMTAIERADASTNWKEFTSPEGRKYYYN 274

Query: 80  KFTRQSTWKMPDELKLARKRLKNEHT 3
           K T++S W +P+ELKLAR+R++   T
Sbjct: 275 KMTKESKWIIPEELKLARERVEKSST 300


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