BLASTX nr result

ID: Atractylodes21_contig00045831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045831
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subc...    75   6e-12
ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group] g...    75   6e-12
ref|XP_002338798.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|NP_001063866.1| Os09g0551200 [Oryza sativa Japonica Group] g...    73   2e-11
gb|ABA96315.1| retrotransposon protein, putative, Ty1-copia subc...    71   1e-10

>gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 904

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/115 (33%), Positives = 67/115 (58%)
 Frame = +2

Query: 5   ASVGLTFEDPVLVRKLLNAVPDRFLQIVASIEQYSNLDTMSLDEAIGRLKTFEERLSYKK 184
           + +G+T +D   V+KLL++VPD+FL ++A+IEQ+S+LD+M  DEAIGRLK +EER+  + 
Sbjct: 564 SDLGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDLDSMPFDEAIGRLKAYEERIRKRD 623

Query: 185 ERSVDIQEGLMFTQHEDXXXXXXXXXXXXXXXXXXXXQDRNNYKYKKEEQASSEE 349
           +++    E L+FT  +                     Q+  ++ Y+  E+   +E
Sbjct: 624 DKN---GEHLLFTSGDTSGGRSRVKKPDRSKTMCYYCQELGHFAYECPEKKKKKE 675


>ref|NP_001044989.1| Os01g0879800 [Oryza sativa Japonica Group]
           gi|113534520|dbj|BAF06903.1| Os01g0879800 [Oryza sativa
           Japonica Group]
          Length = 278

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/115 (33%), Positives = 67/115 (58%)
 Frame = +2

Query: 5   ASVGLTFEDPVLVRKLLNAVPDRFLQIVASIEQYSNLDTMSLDEAIGRLKTFEERLSYKK 184
           + +G+T +D   V+KLL++VPD+FL ++A+IEQ+S+LD+M  DEAIGRLK +EER+  + 
Sbjct: 151 SDLGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDLDSMPFDEAIGRLKAYEERIRKRD 210

Query: 185 ERSVDIQEGLMFTQHEDXXXXXXXXXXXXXXXXXXXXQDRNNYKYKKEEQASSEE 349
           +++    E L+FT  +                     Q+  ++ Y+  E+   +E
Sbjct: 211 DKN---GEHLLFTSGDTSGGRSRVKKPDRSKTMCYYCQELGHFAYECPEKKKKKE 262


>ref|XP_002338798.1| predicted protein [Populus trichocarpa] gi|222873477|gb|EEF10608.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/75 (50%), Positives = 53/75 (70%)
 Frame = +2

Query: 8   SVGLTFEDPVLVRKLLNAVPDRFLQIVASIEQYSNLDTMSLDEAIGRLKTFEERLSYKKE 187
           S+G   E+  +V KL ++VPDRFLQI+ +IEQ+ ++DTMS+ EAIGRL+TFEE L   + 
Sbjct: 144 SLGAKLEESEVVEKLFSSVPDRFLQIIGTIEQFGDVDTMSVSEAIGRLRTFEEGLK-GRS 202

Query: 188 RSVDIQEGLMFTQHE 232
            +    E L+FTQ E
Sbjct: 203 HTESTGEQLLFTQAE 217


>ref|NP_001063866.1| Os09g0551200 [Oryza sativa Japonica Group]
           gi|113632099|dbj|BAF25780.1| Os09g0551200 [Oryza sativa
           Japonica Group]
          Length = 280

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/77 (48%), Positives = 56/77 (72%)
 Frame = +2

Query: 5   ASVGLTFEDPVLVRKLLNAVPDRFLQIVASIEQYSNLDTMSLDEAIGRLKTFEERLSYKK 184
           + +G T  D  LV+KLL++VP++FL I+A+IEQ+ +LDTM  +EAIGRLK FEER+  +K
Sbjct: 151 SGLGATMTDDELVKKLLDSVPEKFLHIIAAIEQFCDLDTMPFEEAIGRLKAFEERI--RK 208

Query: 185 ERSVDIQEGLMFTQHED 235
               D ++ L+ T++ D
Sbjct: 209 HSDNDGEQLLLTTRNTD 225


>gb|ABA96315.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 271

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/73 (49%), Positives = 53/73 (72%)
 Frame = +2

Query: 5   ASVGLTFEDPVLVRKLLNAVPDRFLQIVASIEQYSNLDTMSLDEAIGRLKTFEERLSYKK 184
           + +G T  D  LV+KLL++VP++FL I+A+IEQ+ +LDTM  +EAIGRLK FEER+   +
Sbjct: 142 SGLGATMTDDELVKKLLDSVPEKFLHIIAAIEQFCDLDTMPFEEAIGRLKAFEERI---R 198

Query: 185 ERSVDIQEGLMFT 223
           + S +  E L+ T
Sbjct: 199 KHSDNYGEQLLLT 211


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