BLASTX nr result

ID: Atractylodes21_contig00045760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045760
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   107   1e-21
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              105   4e-21
emb|CAN67721.1| hypothetical protein VITISV_006020 [Vitis vinifera]   101   6e-20
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...    99   4e-19
ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  107 bits (267), Expect = 1e-21
 Identities = 65/123 (52%), Positives = 74/123 (60%), Gaps = 16/123 (13%)
 Frame = +2

Query: 2   KNLRSFSHGLPVVKPTWVLDSVAANKLLSWAPYQLDQLASETNNQPKLSVFLALRN---- 169
           KNLRSFS GLPVVKPTWVLDSVAANKLLSW PYQLDQLA+ET NQPKLS F AL++    
Sbjct: 152 KNLRSFSGGLPVVKPTWVLDSVAANKLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVF 211

Query: 170 ---------NLVP---DDPANGPTSSDINISEVSDSAEDIKLPNQESDSLVHDSYNEAKV 313
                     LVP   D    G TS D   SE     E  +  + E D    ++ NE  +
Sbjct: 212 EDAVTHTTYPLVPETEDSVFKGGTSKDAVSSEGGQYLEYTRQSSGEIDDHQCENTNETII 271

Query: 314 EEP 322
           E+P
Sbjct: 272 EKP 274


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  105 bits (262), Expect = 4e-21
 Identities = 60/107 (56%), Positives = 71/107 (66%)
 Frame = +2

Query: 2   KNLRSFSHGLPVVKPTWVLDSVAANKLLSWAPYQLDQLASETNNQPKLSVFLALRNNLVP 181
           KNLRSFS GLPVVKPTWVLDSVAANKLLSW PYQLDQLA+ET NQPKLS F AL++  V 
Sbjct: 152 KNLRSFSGGLPVVKPTWVLDSVAANKLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVF 211

Query: 182 DDPANGPTSSDINISEVSDSAEDIKLPNQESDSLVHDSYNEAKVEEP 322
           +D     T     + E  DS +     + E D    ++ NE  +E+P
Sbjct: 212 EDAVTHTTYP--LVPETEDSVQS----SGEIDDHQCENTNETIIEKP 252


>emb|CAN67721.1| hypothetical protein VITISV_006020 [Vitis vinifera]
          Length = 500

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/68 (75%), Positives = 55/68 (80%)
 Frame = +2

Query: 2   KNLRSFSHGLPVVKPTWVLDSVAANKLLSWAPYQLDQLASETNNQPKLSVFLALRNNLVP 181
           KNLRSFS GLPVVKPTWVLDSVAANKLLSW PYQLDQLA+ET NQPKLS F AL++  V 
Sbjct: 152 KNLRSFSGGLPVVKPTWVLDSVAANKLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVF 211

Query: 182 DDPANGPT 205
           +D     T
Sbjct: 212 EDAVTHTT 219


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
           gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
           transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 57/119 (47%), Positives = 71/119 (59%), Gaps = 13/119 (10%)
 Frame = +2

Query: 2   KNLRSFSHGLPVVKPTWVLDSVAANKLLSWAPYQLDQLASETNNQPKLSVFLALRNNLVP 181
           KNLRSFS GLPVV+P W+LDSVAANKLLSW PYQL+QLA   NNQPKLS F  ++N    
Sbjct: 146 KNLRSFSGGLPVVRPAWILDSVAANKLLSWVPYQLEQLA---NNQPKLSAFFCMKNKAAS 202

Query: 182 DDPAN-------------GPTSSDINISEVSDSAEDIKLPNQESDSLVHDSYNEAKVEE 319
           +D  N             G TS D N+ EV+D  +  K  + + D      Y + ++EE
Sbjct: 203 EDDLNIEAFQVMLDPSLKGGTSQDTNLPEVNDPVKYGKPIDGQFD------YPDCEIEE 255


>ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|222850288|gb|EEE87835.1|
           predicted protein [Populus trichocarpa]
          Length = 1191

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 59/125 (47%), Positives = 75/125 (60%), Gaps = 20/125 (16%)
 Frame = +2

Query: 2   KNLRSFSHGLPVVKPTWVLDSVAANKLLSWAPYQLDQLASETNNQPKLSVFLALRNNLVP 181
           KNLRSFS GLPVVKP W+LDS+ ANKLL+W PYQL+QLA   NNQPKLS F  L++N VP
Sbjct: 147 KNLRSFSGGLPVVKPEWILDSIVANKLLNWFPYQLNQLA---NNQPKLSAFFTLKSNPVP 203

Query: 182 D------------DP-ANGPTSSDINISEVSD-------SAEDIKLPNQESDSLVHDSYN 301
           +            DP   G T+ D+ ISEV +       + E +  PN + + L   S  
Sbjct: 204 ENVLTDEVCQVNLDPILKGGTTKDVYISEVDEPVRFAEQAGELLDDPNHQLEELNGSSGK 263

Query: 302 EAKVE 316
            A+V+
Sbjct: 264 SAEVK 268


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