BLASTX nr result

ID: Atractylodes21_contig00045680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045680
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814...   119   3e-25
gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]   115   5e-24
ref|XP_002519367.1| replication factor C / DNA polymerase III ga...   114   6e-24
ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791...   112   3e-23
ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242...   109   2e-22

>ref|XP_003528725.1| PREDICTED: uncharacterized protein LOC100814391 [Glycine max]
          Length = 1237

 Score =  119 bits (298), Expect = 3e-25
 Identities = 62/98 (63%), Positives = 75/98 (76%), Gaps = 3/98 (3%)
 Frame = -1

Query: 285 GIPCYWSSSKRSTPKRGVCGGCYSPSFSDTLRRKGSSMLCGSQTMYHRRRHGSSVGACNK 106
           GIPCYWS  KR+   RG+CG CYSPS SDTLRRKGSSMLCGSQT+Y R R  +S  A +K
Sbjct: 313 GIPCYWS--KRTPKHRGMCGSCYSPSLSDTLRRKGSSMLCGSQTIYPRHRRSAS--ASHK 368

Query: 105 KRLVHRTSQGLVPLLTNGAESRDRSSVGT---DDELST 1
           +RL  R+++G++PLLTN  + R+ SSVGT   DDELST
Sbjct: 369 RRLSLRSARGVIPLLTNSGDVREGSSVGTGRSDDELST 406


>gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]
          Length = 1223

 Score =  115 bits (287), Expect = 5e-24
 Identities = 59/98 (60%), Positives = 73/98 (74%), Gaps = 3/98 (3%)
 Frame = -1

Query: 285 GIPCYWSSSKRSTPKRGVCGGCYSPSFSDTLRRKGSSMLCGSQTMYHRRRHGSSVGACNK 106
           GIPCYW+  KR+   R VCG CYSPS SDTLRRKGSS+LCGSQ+MYH  RH  S+   NK
Sbjct: 320 GIPCYWT--KRTPKHRVVCGSCYSPSLSDTLRRKGSSILCGSQSMYH--RHRRSLSLSNK 375

Query: 105 KRLVHRTSQGLVPLLTNGAESRDRSSVGT---DDELST 1
           ++   R++QG++PLL+N A+ R  SS+GT   DDELST
Sbjct: 376 RKNALRSAQGVLPLLSNSADGRGGSSIGTRCSDDELST 413


>ref|XP_002519367.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223541434|gb|EEF42984.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1270

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 3/98 (3%)
 Frame = -1

Query: 285 GIPCYWSSSKRSTPKRGVCGGCYSPSFSDTLRRKGSSMLCGSQTMYHRRRHGSSVGACNK 106
           GIPCYWS  KR+   RGVCG C SPS SDT++RKG+SMLCG Q+MYHRR H SSV   NK
Sbjct: 315 GIPCYWS--KRTPRHRGVCGSCCSPSLSDTIQRKGTSMLCGRQSMYHRRWHSSSV--YNK 370

Query: 105 KRLVHRTSQGLVPLLTNGAESRDRSSVGT---DDELST 1
           +R+  R++QGL+PLL N ++ R  SS+GT   DDELST
Sbjct: 371 RRISSRSAQGLLPLLAN-SDGRGGSSIGTGNSDDELST 407


>ref|XP_003550458.1| PREDICTED: uncharacterized protein LOC100791561 [Glycine max]
          Length = 1236

 Score =  112 bits (280), Expect = 3e-23
 Identities = 61/100 (61%), Positives = 74/100 (74%), Gaps = 5/100 (5%)
 Frame = -1

Query: 285 GIPCYWSSSKRSTPKRGVCGGCYSPSFSDTLRRKGSSMLCGSQTMY--HRRRHGSSVGAC 112
           GIPCYWS  KR+   R +CG CYSPS SDTLRRKGSSMLCGSQ++Y  HRR    S  A 
Sbjct: 310 GIPCYWS--KRTPKHRRMCGSCYSPSLSDTLRRKGSSMLCGSQSIYPTHRR----SASAS 363

Query: 111 NKKRLVHRTSQGLVPLLTNGAESRDRSSVGT---DDELST 1
           +K+RL  R+++G++PLLTN  + R+ SSVGT   DDELST
Sbjct: 364 HKRRLSLRSARGVIPLLTNSGDVREGSSVGTGWSDDELST 403


>ref|XP_002268959.2| PREDICTED: uncharacterized protein LOC100242129 [Vitis vinifera]
          Length = 1274

 Score =  109 bits (273), Expect = 2e-22
 Identities = 63/101 (62%), Positives = 74/101 (73%), Gaps = 6/101 (5%)
 Frame = -1

Query: 285 GIPCYWSSSKRSTPK-RGVCGG--CYSPSFSDTLRRKGSSMLCGSQTMYHRRRHGSSVGA 115
           GIPCYWS  +RSTP+ RG+CG   C SPS SDT+RRKGSSMLCGSQT+Y  RRHG  +G+
Sbjct: 302 GIPCYWS--RRSTPRHRGICGSGSCDSPSLSDTIRRKGSSMLCGSQTIY-PRRHGLPLGS 358

Query: 114 CNKKRLVHRTSQGLVPLLTNGAESRDRSSVGT---DDELST 1
             K+R V  T QGL+PLLTN  +    SS+GT   DDELST
Sbjct: 359 -KKRRSVSMTPQGLLPLLTNSCDGHGGSSMGTGRSDDELST 398


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