BLASTX nr result

ID: Atractylodes21_contig00045586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045586
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-42
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]   176   1e-42
ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-38
ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [S...   156   1e-36
gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]        153   2e-35

>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
           [Vitis vinifera]
          Length = 576

 Score =  176 bits (447), Expect = 1e-42
 Identities = 84/123 (68%), Positives = 101/123 (82%)
 Frame = +3

Query: 3   VFDEMLVRDLVAWNAMICGYCKVGEVERACALVEIMPERNVISWTALISGYAQVNKPCEA 182
           +FD +  RD+  WNAM+ GY KVG+V+ A  L E MPERNVISWTA+I+GYAQ+++P EA
Sbjct: 196 LFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEA 255

Query: 183 IDVFRRMQIDGVRSDEVAMLAALSACAQLGALELGEWIHGYIDEHNLRKSIPLNNALIDM 362
           I +FRRMQ++ V  DE+AMLAALSACA LGALELGEWIH YID+H L K +PLNNALIDM
Sbjct: 256 ITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDM 315

Query: 363 YAK 371
           YAK
Sbjct: 316 YAK 318



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/112 (29%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
 Frame = +3

Query: 42  NAMICGYCKVGEVERACALVEIMPERNVISWTALISGYAQVNKPCEAIDVFRRMQIDGVR 221
           NA+I  Y K G++E+A  + + M  ++VI+WT++I G A      EA+++F  M+ + ++
Sbjct: 310 NALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIK 369

Query: 222 SDEVAMLAALSACAQLGALELGEWIHGYI-DEHNLRKSIPLNNALIDMYAKS 374
            +E+  +A LSAC  +G +E+G W    +  ++ ++  I     +ID+  ++
Sbjct: 370 PNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRA 421


>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
          Length = 576

 Score =  176 bits (447), Expect = 1e-42
 Identities = 84/123 (68%), Positives = 101/123 (82%)
 Frame = +3

Query: 3   VFDEMLVRDLVAWNAMICGYCKVGEVERACALVEIMPERNVISWTALISGYAQVNKPCEA 182
           +FD +  RD+  WNAM+ GY KVG+V+ A  L E MPERNVISWTA+I+GYAQ+++P EA
Sbjct: 196 LFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEA 255

Query: 183 IDVFRRMQIDGVRSDEVAMLAALSACAQLGALELGEWIHGYIDEHNLRKSIPLNNALIDM 362
           I +FRRMQ++ V  DE+AMLAALSACA LGALELGEWIH YID+H L K +PLNNALIDM
Sbjct: 256 ITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDM 315

Query: 363 YAK 371
           YAK
Sbjct: 316 YAK 318



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/112 (29%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
 Frame = +3

Query: 42  NAMICGYCKVGEVERACALVEIMPERNVISWTALISGYAQVNKPCEAIDVFRRMQIDGVR 221
           NA+I  Y K G++E+A  + + M  ++VI+WT++I G A      EA+++F  M+ + ++
Sbjct: 310 NALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIK 369

Query: 222 SDEVAMLAALSACAQLGALELGEWIHGYI-DEHNLRKSIPLNNALIDMYAKS 374
            +E+  +A LSAC  +G +E+G W    +  ++ ++  I     +ID+  ++
Sbjct: 370 PNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRA 421


>ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
           gi|449493602|ref|XP_004159370.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 548

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/124 (61%), Positives = 97/124 (78%)
 Frame = +3

Query: 3   VFDEMLVRDLVAWNAMICGYCKVGEVERACALVEIMPERNVISWTALISGYAQVNKPCEA 182
           +FD +  +D+  WNAM+ GY KVGE++ A  +   MP+RNVISWT LI+GYAQ N+P EA
Sbjct: 179 LFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEA 238

Query: 183 IDVFRRMQIDGVRSDEVAMLAALSACAQLGALELGEWIHGYIDEHNLRKSIPLNNALIDM 362
           I++FR+MQ++ V  DE+AMLA LSACA LGALELGEWIH YI++H L + + L NALIDM
Sbjct: 239 IELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDM 298

Query: 363 YAKS 374
           YAKS
Sbjct: 299 YAKS 302



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
 Frame = +3

Query: 18  LVRDLVAWNAMICGYCKVGEVERACALVEIMPERNVISWTALISGYAQVNKPCEAIDVFR 197
           L R +  +NA+I  Y K G + RA  + E M +++VI+W+ +I+  A      EAID+F 
Sbjct: 285 LCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFL 344

Query: 198 RMQIDGVRSDEVAMLAALSACAQLGALELGEWIHGYIDE----HNLRKSIPLNNALIDMY 365
           RM+   VR +EV  +A LSAC+ +G +++G +   Y D+    + +   I     +ID+ 
Sbjct: 345 RMEKAKVRPNEVTFVAILSACSHVGMVDVGRY---YFDQMQSMYKIEPKIEHYGCMIDLL 401

Query: 366 AKS 374
           A++
Sbjct: 402 ARA 404


>ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
           gi|241927367|gb|EES00512.1| hypothetical protein
           SORBIDRAFT_03g010050 [Sorghum bicolor]
          Length = 506

 Score =  156 bits (395), Expect = 1e-36
 Identities = 70/123 (56%), Positives = 93/123 (75%)
 Frame = +3

Query: 3   VFDEMLVRDLVAWNAMICGYCKVGEVERACALVEIMPERNVISWTALISGYAQVNKPCEA 182
           VF EM VRD+VAWN MI GY K G++  A  L + MPERNV+SWT +I GYAQ+ +P EA
Sbjct: 136 VFHEMAVRDVVAWNVMIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEA 195

Query: 183 IDVFRRMQIDGVRSDEVAMLAALSACAQLGALELGEWIHGYIDEHNLRKSIPLNNALIDM 362
           ++VFRRMQ++G+  D VA+L+ LSAC  LGA++LGEW+H ++    LR+ IPL N++IDM
Sbjct: 196 VEVFRRMQVEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDM 255

Query: 363 YAK 371
           Y K
Sbjct: 256 YMK 258



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/120 (29%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
 Frame = +3

Query: 18  LVRDLVAWNAMICGYCKVGEVERACALVEIMPERNVISWTALISGYAQVNKPCEAIDVFR 197
           L +++   N++I  Y K G +E+A  + E M E++V++WT LI+G+A      +A+++FR
Sbjct: 242 LRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFR 301

Query: 198 RMQIDGVRSDEVAMLAALSACAQLGALELGEWIHG-YIDEHNLRKSIPLNNALIDMYAKS 374
           RM+ + +  ++V  LA LSAC+ +G  +LG W     + ++ ++  +     ++D+  ++
Sbjct: 302 RMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRA 361


>gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
          Length = 505

 Score =  153 bits (386), Expect = 2e-35
 Identities = 68/123 (55%), Positives = 93/123 (75%)
 Frame = +3

Query: 3   VFDEMLVRDLVAWNAMICGYCKVGEVERACALVEIMPERNVISWTALISGYAQVNKPCEA 182
           VFDEM VRD+VAWN MI GY K G+   A  L + MPERNV+SWT +I GYAQ+ +P +A
Sbjct: 135 VFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEKA 194

Query: 183 IDVFRRMQIDGVRSDEVAMLAALSACAQLGALELGEWIHGYIDEHNLRKSIPLNNALIDM 362
           ++VFRRMQ++G+ +D VA+L+ L+AC  LGA++LGEW+H ++    L + IPL N++IDM
Sbjct: 195 VEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDM 254

Query: 363 YAK 371
           Y K
Sbjct: 255 YMK 257



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/120 (28%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
 Frame = +3

Query: 18  LVRDLVAWNAMICGYCKVGEVERACALVEIMPERNVISWTALISGYAQVNKPCEAIDVFR 197
           L +++   N++I  Y K G +E+A  + E M E++V++WT LI+G+A      +A+++F 
Sbjct: 241 LCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFC 300

Query: 198 RMQIDGVRSDEVAMLAALSACAQLGALELGEWIHG-YIDEHNLRKSIPLNNALIDMYAKS 374
           RM+ + +  + V  LA LSAC+ +G  +LG W     + ++ ++  +     ++D+  ++
Sbjct: 301 RMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYGCMVDLLGRA 360


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