BLASTX nr result

ID: Atractylodes21_contig00045177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045177
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...    65   4e-09
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...    64   2e-08
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]    63   3e-08
ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...    62   4e-08

>ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|222865934|gb|EEF03065.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/60 (65%), Positives = 44/60 (73%), Gaps = 5/60 (8%)
 Frame = +2

Query: 2   STCPLCRSSLLSDFS-SNTCSPIVLVLESGSSEISREIVNSEP----NTSSLQRVNSHLS 166
           STCPLCR+ LLSDFS +N+CSPIVLVLESG  E SREIVN        T+S+   NSHLS
Sbjct: 166 STCPLCRACLLSDFSPNNSCSPIVLVLESG-GESSREIVNDREADIGRTTSVLTTNSHLS 224


>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
           partial [Glycine max]
          Length = 524

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/54 (66%), Positives = 43/54 (79%), Gaps = 2/54 (3%)
 Frame = +2

Query: 2   STCPLCRSSLLSDFS-SNTCSPIVLVLESGSSEISREIV-NSEPNTSSLQRVNS 157
           STCPLCR++LL +FS SN CSPIVLVLESGSSE SREIV   EP  +++ R +S
Sbjct: 170 STCPLCRATLLPEFSASNACSPIVLVLESGSSESSREIVPEREPAAAAVGRTSS 223


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 4/58 (6%)
 Frame = +2

Query: 2   STCPLCRSSLLSDFSSN-TCSPIVLVLESGSSEISREIVNSEPN---TSSLQRVNSHL 163
           STCPLCR SLL +FSSN +CSP+VLVLESG SE SREI+    N   TSS+   NS+L
Sbjct: 170 STCPLCRGSLLPEFSSNSSCSPVVLVLESG-SESSREIITDRDNIGRTSSVLTTNSYL 226


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/59 (64%), Positives = 43/59 (72%), Gaps = 5/59 (8%)
 Frame = +2

Query: 2   STCPLCRSSLLSDFSSN-TCSPIVLVLESGSSEISREIVNSEPN----TSSLQRVNSHL 163
           STCPLCR+SLL DFS N  CSPIVLVLESG SE SREIV+   +     +S+ R NSHL
Sbjct: 210 STCPLCRASLLPDFSPNDICSPIVLVLESG-SESSREIVSDRHSALGTNNSVLRTNSHL 267


>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/59 (64%), Positives = 42/59 (71%), Gaps = 5/59 (8%)
 Frame = +2

Query: 2   STCPLCRSSLLSDFSSN-TCSPIVLVLESGSSEISREIVNSEPN----TSSLQRVNSHL 163
           STCPLCR SLL DFS N  CSPIVLVLESG SE SREIV+   +     +S+ R NSHL
Sbjct: 210 STCPLCRGSLLPDFSPNDICSPIVLVLESG-SESSREIVSDRHSALGTNNSVLRTNSHL 267


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