BLASTX nr result

ID: Atractylodes21_contig00044129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00044129
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    59   5e-07

>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
 Frame = +3

Query: 6    IEKLMRNFLWGNDDSTRGKAKVAWSMDS*KS-------RRPWN*IVTTMEQSFNIKTFME 164
            IE++   FLWGND + RG  KV+W              R  W     T  ++ N++    
Sbjct: 831  IEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFW-----TWNKTLNLRLIWM 885

Query: 165  LMVKKEYLWVKWSFLNKVKDRSLWDVRDGNDATWSWKKLVN*R 293
            L  +++ LWV W+  N+++  + W+    +  +W WK ++  R
Sbjct: 886  LFARRDSLWVAWNHANRLRHVNFWNAEAASHHSWIWKAILGLR 928


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