BLASTX nr result

ID: Atractylodes21_contig00043933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043933
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196051.2| pectate lyase family protein [Arabidopsis thali...   200   1e-49
ref|XP_002873143.1| pectate lyase family protein [Arabidopsis ly...   200   1e-49
gb|AAL24172.1| putative pectate lyase [Arabidopsis thaliana] gi|...   200   1e-49
ref|XP_003555884.1| PREDICTED: probable pectate lyase 12-like [G...   198   4e-49
ref|XP_003535737.1| PREDICTED: probable pectate lyase 12-like [G...   193   1e-47

>ref|NP_196051.2| pectate lyase family protein [Arabidopsis thaliana]
           gi|332003342|gb|AED90725.1| pectate lyase family protein
           [Arabidopsis thaliana]
          Length = 518

 Score =  200 bits (508), Expect = 1e-49
 Identities = 86/105 (81%), Positives = 97/105 (92%)
 Frame = +3

Query: 3   HHNEVMLMGHDDAYLPDKGMQVTFAFNHFGKGLIQRMPRCRHGYFHVVNNDFTEWKMYAI 182
           HH+EVML+GHDD Y  DKGMQVT AFNHFG+GL+QRMPRCRHGY HVVNNDFT W+MYAI
Sbjct: 286 HHDEVMLLGHDDRYTADKGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAI 345

Query: 183 GGSANPTINSQGNRYIAPPDPNAKEVTKRVEANEKNWAGWNWRTD 317
           GGSA+PTINSQGNRY AP DPNAKEVTKRV++NEK+W+GWNWRT+
Sbjct: 346 GGSASPTINSQGNRYTAPIDPNAKEVTKRVDSNEKHWSGWNWRTE 390


>ref|XP_002873143.1| pectate lyase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318980|gb|EFH49402.1| pectate lyase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 519

 Score =  200 bits (508), Expect = 1e-49
 Identities = 86/105 (81%), Positives = 97/105 (92%)
 Frame = +3

Query: 3   HHNEVMLMGHDDAYLPDKGMQVTFAFNHFGKGLIQRMPRCRHGYFHVVNNDFTEWKMYAI 182
           HH+EVML+GHDD Y  DKGMQVT AFNHFG+GL+QRMPRCRHGY HVVNNDFT W+MYAI
Sbjct: 289 HHDEVMLLGHDDRYTADKGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAI 348

Query: 183 GGSANPTINSQGNRYIAPPDPNAKEVTKRVEANEKNWAGWNWRTD 317
           GGSA+PTINSQGNRY AP DPNAKEVTKRV++NEK+W+GWNWRT+
Sbjct: 349 GGSASPTINSQGNRYTAPIDPNAKEVTKRVDSNEKHWSGWNWRTE 393


>gb|AAL24172.1| putative pectate lyase [Arabidopsis thaliana]
           gi|20466073|gb|AAM19958.1| At5g04300/At5g04300
           [Arabidopsis thaliana]
          Length = 349

 Score =  200 bits (508), Expect = 1e-49
 Identities = 86/105 (81%), Positives = 97/105 (92%)
 Frame = +3

Query: 3   HHNEVMLMGHDDAYLPDKGMQVTFAFNHFGKGLIQRMPRCRHGYFHVVNNDFTEWKMYAI 182
           HH+EVML+GHDD Y  DKGMQVT AFNHFG+GL+QRMPRCRHGY HVVNNDFT W+MYAI
Sbjct: 117 HHDEVMLLGHDDRYTADKGMQVTIAFNHFGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAI 176

Query: 183 GGSANPTINSQGNRYIAPPDPNAKEVTKRVEANEKNWAGWNWRTD 317
           GGSA+PTINSQGNRY AP DPNAKEVTKRV++NEK+W+GWNWRT+
Sbjct: 177 GGSASPTINSQGNRYTAPIDPNAKEVTKRVDSNEKHWSGWNWRTE 221


>ref|XP_003555884.1| PREDICTED: probable pectate lyase 12-like [Glycine max]
          Length = 502

 Score =  198 bits (503), Expect = 4e-49
 Identities = 84/105 (80%), Positives = 97/105 (92%)
 Frame = +3

Query: 3   HHNEVMLMGHDDAYLPDKGMQVTFAFNHFGKGLIQRMPRCRHGYFHVVNNDFTEWKMYAI 182
           HH+EVML+GHDD YLPD+GMQVT AFNHFG+GL+QRMPRCR GY HVVNNDFT+WKMYAI
Sbjct: 265 HHDEVMLLGHDDKYLPDRGMQVTIAFNHFGEGLVQRMPRCRLGYIHVVNNDFTQWKMYAI 324

Query: 183 GGSANPTINSQGNRYIAPPDPNAKEVTKRVEANEKNWAGWNWRTD 317
           GGSANPTINSQGNRY AP DP+AKEVTKRV+ +++ W+GWNWRT+
Sbjct: 325 GGSANPTINSQGNRYTAPADPDAKEVTKRVDTDDREWSGWNWRTE 369


>ref|XP_003535737.1| PREDICTED: probable pectate lyase 12-like [Glycine max]
          Length = 676

 Score =  193 bits (490), Expect = 1e-47
 Identities = 82/105 (78%), Positives = 96/105 (91%)
 Frame = +3

Query: 3   HHNEVMLMGHDDAYLPDKGMQVTFAFNHFGKGLIQRMPRCRHGYFHVVNNDFTEWKMYAI 182
           HH+EVML+GHDD YL D+GMQVT AFNHFG+GL+QRMPRCR GY HVVNNDFT+W+MYAI
Sbjct: 436 HHDEVMLLGHDDKYLVDRGMQVTIAFNHFGEGLVQRMPRCRLGYIHVVNNDFTQWRMYAI 495

Query: 183 GGSANPTINSQGNRYIAPPDPNAKEVTKRVEANEKNWAGWNWRTD 317
           GGSANPTINSQGNRY AP DP+AKEVTKRV+ +++ W+GWNWRT+
Sbjct: 496 GGSANPTINSQGNRYTAPGDPDAKEVTKRVDTDDREWSGWNWRTE 540


Top