BLASTX nr result

ID: Atractylodes21_contig00043615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043615
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530366.1| Transmembrane and coiled-coil domains protei...   192   2e-47
ref|XP_002871226.1| hypothetical protein ARALYDRAFT_908596 [Arab...   189   2e-46
gb|AFW90618.1| transmembrane and coiled-coil domains protein [So...   189   3e-46
gb|AAQ84318.1| fiber protein Fb27 [Gossypium barbadense]              187   1e-45
ref|NP_196284.1| uncharacterized protein [Arabidopsis thaliana] ...   187   1e-45

>ref|XP_002530366.1| Transmembrane and coiled-coil domains protein, putative [Ricinus
           communis] gi|223530113|gb|EEF32027.1| Transmembrane and
           coiled-coil domains protein, putative [Ricinus communis]
          Length = 192

 Score =  192 bits (489), Expect = 2e-47
 Identities = 100/140 (71%), Positives = 112/140 (80%), Gaps = 2/140 (1%)
 Frame = +2

Query: 2   FFSAFKYSDSLTIAGISFFNAIVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKTDST 181
           F S+FKY+DSLT+ GIS   A+VCEAISW+LIYR  SY+SLKS+IDKASKKLETMKTD+T
Sbjct: 6   FLSSFKYADSLTVVGISMCTAVVCEAISWILIYRTNSYRSLKSSIDKASKKLETMKTDTT 65

Query: 182 AL--KKSKTKKIDRVETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLYEGKAVAKL 355
            +  KKSKTKKIDRVETSLKESSRDLSLFKFKS               NSL+EGK VAKL
Sbjct: 66  KIITKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFIVFGLLNSLFEGKVVAKL 125

Query: 356 PFVPLRIVQKMSHRGLQGDD 415
           PF P+ IV+KMSHRGLQGDD
Sbjct: 126 PFTPIAIVRKMSHRGLQGDD 145


>ref|XP_002871226.1| hypothetical protein ARALYDRAFT_908596 [Arabidopsis lyrata subsp.
           lyrata] gi|297317063|gb|EFH47485.1| hypothetical protein
           ARALYDRAFT_908596 [Arabidopsis lyrata subsp. lyrata]
          Length = 196

 Score =  189 bits (481), Expect = 2e-46
 Identities = 99/141 (70%), Positives = 114/141 (80%), Gaps = 4/141 (2%)
 Frame = +2

Query: 5   FSAFKYSDSLTIAGISFFNAIVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKTDST- 181
           F++FKY+DSLT+ GISF  A+VCEAISW+LIYR +SYKSLKS+IDKASKKLETMKTD+  
Sbjct: 8   FASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLETMKTDNPS 67

Query: 182 ---ALKKSKTKKIDRVETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLYEGKAVAK 352
              A+KKSKTKKIDRVE+SLKESSRDLSLFKFKS               NSL+EGK VAK
Sbjct: 68  SKLAIKKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAK 127

Query: 353 LPFVPLRIVQKMSHRGLQGDD 415
           LPF P+ IV+KMSHRGL+GDD
Sbjct: 128 LPFHPITIVRKMSHRGLKGDD 148


>gb|AFW90618.1| transmembrane and coiled-coil domains protein [Solanum tuberosum]
          Length = 194

 Score =  189 bits (479), Expect = 3e-46
 Identities = 103/142 (72%), Positives = 109/142 (76%), Gaps = 4/142 (2%)
 Frame = +2

Query: 2   FFSAFKYSDSLTIAGISFFNAIVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKTD-- 175
           FFS  KYSDSLT+ GIS   AIVCEAIS+LLIYR TSYKSLKSTIDKASKKLETMKT   
Sbjct: 6   FFSNTKYSDSLTLVGISICTAIVCEAISYLLIYRTTSYKSLKSTIDKASKKLETMKTQEP 65

Query: 176 --STALKKSKTKKIDRVETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLYEGKAVA 349
             S   KKSKTKKIDRVETSLKES+RDLSLFKFKS               NSL+EGK VA
Sbjct: 66  VPSVLTKKSKTKKIDRVETSLKESTRDLSLFKFKSGFVVAVVLFMVFGFLNSLFEGKVVA 125

Query: 350 KLPFVPLRIVQKMSHRGLQGDD 415
           KLPF+P R+VQKMSHRGL GDD
Sbjct: 126 KLPFIPFRLVQKMSHRGLPGDD 147


>gb|AAQ84318.1| fiber protein Fb27 [Gossypium barbadense]
          Length = 194

 Score =  187 bits (474), Expect = 1e-45
 Identities = 100/142 (70%), Positives = 109/142 (76%), Gaps = 4/142 (2%)
 Frame = +2

Query: 2   FFSAFKYSDSLTIAGISFFNAIVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKTDST 181
           F S+F+YSDSLT+  ISF  AIVCEAISWLLIYR  SYKSLKS+IDKA+KKLETMKTD  
Sbjct: 6   FLSSFQYSDSLTVVAISFCTAIVCEAISWLLIYRTNSYKSLKSSIDKAAKKLETMKTDQN 65

Query: 182 ----ALKKSKTKKIDRVETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLYEGKAVA 349
               + KKSKTKKIDRVETSLKESSRDLSLFKFKS               NSL+EGK VA
Sbjct: 66  PSKLSTKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLIVVFGFLNSLFEGKVVA 125

Query: 350 KLPFVPLRIVQKMSHRGLQGDD 415
           KLPF P+ IV KMSHRGL+GDD
Sbjct: 126 KLPFKPIGIVMKMSHRGLKGDD 147


>ref|NP_196284.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10178122|dbj|BAB11415.1| unnamed protein product
           [Arabidopsis thaliana] gi|14532446|gb|AAK63951.1|
           AT5g06660/F15M7_19 [Arabidopsis thaliana]
           gi|16974515|gb|AAL31167.1| AT5g06660/F15M7_19
           [Arabidopsis thaliana] gi|332003664|gb|AED91047.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 196

 Score =  187 bits (474), Expect = 1e-45
 Identities = 98/141 (69%), Positives = 113/141 (80%), Gaps = 4/141 (2%)
 Frame = +2

Query: 5   FSAFKYSDSLTIAGISFFNAIVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKTDSTA 184
           F++FKY+DSLT+ GISF  A+VCEAISW+LIYR +SYKSLKS+IDKASKKLETMKTD+ +
Sbjct: 8   FASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLETMKTDNPS 67

Query: 185 LK----KSKTKKIDRVETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLYEGKAVAK 352
            K    KSKTKKIDRVE+SLKESSRDLSLFKFKS               NSL+EGK VAK
Sbjct: 68  SKLTNKKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAK 127

Query: 353 LPFVPLRIVQKMSHRGLQGDD 415
           LPF P+ IV+KMSHRGL+GDD
Sbjct: 128 LPFHPITIVRKMSHRGLKGDD 148


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