BLASTX nr result

ID: Atractylodes21_contig00043486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043486
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255...   187   6e-46
emb|CBI17281.3| unnamed protein product [Vitis vinifera]              187   6e-46
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]   187   6e-46
ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subuni...   181   5e-44
ref|XP_004139015.1| PREDICTED: small subunit processome componen...   181   5e-44

>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
          Length = 3196

 Score =  187 bits (476), Expect = 6e-46
 Identities = 95/128 (74%), Positives = 111/128 (86%)
 Frame = +2

Query: 2    PSLDSQADNIKSALFVILHGSVNATSALAESCIRLLTVLLRSTSITLSSDQMHMLVQFPL 181
            P+L++QAD IKSAL  I   SVNA S L +SC+ LLT LLRST ITLS+DQ+H+L+QFPL
Sbjct: 1581 PALETQADGIKSALLDIAQSSVNANSPLMQSCLSLLTALLRSTKITLSTDQLHLLIQFPL 1640

Query: 182  FVDLERNPSFVALSLLKAIVNRKVVVPEIYDLAKQVAELMVTSQVEPIRKKCSQIFLQFL 361
            FVDLERNPSF+ALSLLKAI++RK+VV EIYD+  +VAELMVTSQVEPIRKKCSQI LQFL
Sbjct: 1641 FVDLERNPSFIALSLLKAIISRKLVVHEIYDVVTRVAELMVTSQVEPIRKKCSQILLQFL 1700

Query: 362  LDYSLSQK 385
            LDY LS+K
Sbjct: 1701 LDYHLSEK 1708


>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
          Length = 2629

 Score =  187 bits (476), Expect = 6e-46
 Identities = 95/128 (74%), Positives = 111/128 (86%)
 Frame = +2

Query: 2    PSLDSQADNIKSALFVILHGSVNATSALAESCIRLLTVLLRSTSITLSSDQMHMLVQFPL 181
            P+L++QAD IKSAL  I   SVNA S L +SC+ LLT LLRST ITLS+DQ+H+L+QFPL
Sbjct: 2013 PALETQADGIKSALLDIAQSSVNANSPLMQSCLSLLTALLRSTKITLSTDQLHLLIQFPL 2072

Query: 182  FVDLERNPSFVALSLLKAIVNRKVVVPEIYDLAKQVAELMVTSQVEPIRKKCSQIFLQFL 361
            FVDLERNPSF+ALSLLKAI++RK+VV EIYD+  +VAELMVTSQVEPIRKKCSQI LQFL
Sbjct: 2073 FVDLERNPSFIALSLLKAIISRKLVVHEIYDVVTRVAELMVTSQVEPIRKKCSQILLQFL 2132

Query: 362  LDYSLSQK 385
            LDY LS+K
Sbjct: 2133 LDYHLSEK 2140


>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
          Length = 2461

 Score =  187 bits (476), Expect = 6e-46
 Identities = 95/128 (74%), Positives = 111/128 (86%)
 Frame = +2

Query: 2    PSLDSQADNIKSALFVILHGSVNATSALAESCIRLLTVLLRSTSITLSSDQMHMLVQFPL 181
            P+L++QAD IKSAL  I   SVNA S L +SC+ LLT LLRST ITLS+DQ+H+L+QFPL
Sbjct: 1845 PALETQADGIKSALLDIAQSSVNANSPLMQSCLSLLTALLRSTKITLSTDQLHLLIQFPL 1904

Query: 182  FVDLERNPSFVALSLLKAIVNRKVVVPEIYDLAKQVAELMVTSQVEPIRKKCSQIFLQFL 361
            FVDLERNPSF+ALSLLKAI++RK+VV EIYD+  +VAELMVTSQVEPIRKKCSQI LQFL
Sbjct: 1905 FVDLERNPSFIALSLLKAIISRKLVVHEIYDVVTRVAELMVTSQVEPIRKKCSQILLQFL 1964

Query: 362  LDYSLSQK 385
            LDY LS+K
Sbjct: 1965 LDYHLSEK 1972


>ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component 20
            homolog, partial [Cucumis sativus]
          Length = 2538

 Score =  181 bits (459), Expect = 5e-44
 Identities = 90/128 (70%), Positives = 110/128 (85%)
 Frame = +2

Query: 2    PSLDSQADNIKSALFVILHGSVNATSALAESCIRLLTVLLRSTSITLSSDQMHMLVQFPL 181
            PS+ SQAD IK  + +I   SV+  + L ESC+RLLTVLLR+  +TLS+DQ+H+L+QFPL
Sbjct: 1921 PSVKSQADKIKGVVLLIAQSSVDPRNPLVESCLRLLTVLLRNEKVTLSTDQLHLLIQFPL 1980

Query: 182  FVDLERNPSFVALSLLKAIVNRKVVVPEIYDLAKQVAELMVTSQVEPIRKKCSQIFLQFL 361
            FVD+++NPSFVALSLLKAIV+RK+VVPEIYDLA +VAELMVTSQVEPIRKKC +I LQFL
Sbjct: 1981 FVDIDKNPSFVALSLLKAIVSRKLVVPEIYDLAIRVAELMVTSQVEPIRKKCGKILLQFL 2040

Query: 362  LDYSLSQK 385
            LDY LS+K
Sbjct: 2041 LDYHLSEK 2048


>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
            sativus]
          Length = 2696

 Score =  181 bits (459), Expect = 5e-44
 Identities = 90/128 (70%), Positives = 110/128 (85%)
 Frame = +2

Query: 2    PSLDSQADNIKSALFVILHGSVNATSALAESCIRLLTVLLRSTSITLSSDQMHMLVQFPL 181
            PS+ SQAD IK  + +I   SV+  + L ESC+RLLTVLLR+  +TLS+DQ+H+L+QFPL
Sbjct: 2079 PSVKSQADKIKGVVLLIAQSSVDPRNPLVESCLRLLTVLLRNEKVTLSTDQLHLLIQFPL 2138

Query: 182  FVDLERNPSFVALSLLKAIVNRKVVVPEIYDLAKQVAELMVTSQVEPIRKKCSQIFLQFL 361
            FVD+++NPSFVALSLLKAIV+RK+VVPEIYDLA +VAELMVTSQVEPIRKKC +I LQFL
Sbjct: 2139 FVDIDKNPSFVALSLLKAIVSRKLVVPEIYDLAIRVAELMVTSQVEPIRKKCGKILLQFL 2198

Query: 362  LDYSLSQK 385
            LDY LS+K
Sbjct: 2199 LDYHLSEK 2206


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