BLASTX nr result

ID: Atractylodes21_contig00043479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043479
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   216   2e-54
emb|CBI35182.3| unnamed protein product [Vitis vinifera]              212   6e-53
ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [...   212   6e-53
ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|2...   210   2e-52
emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]   203   3e-50

>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 548

 Score =  216 bits (551), Expect = 2e-54
 Identities = 112/174 (64%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
 Frame = -1

Query: 584 NAAVGPGYGASPHFMPAPRQIDSYFPPAEMPKQLEKQPHQGISTYGREAP-GMHAXXXXX 408
           NA  GPGYG +P +MP PRQI++Y+PPA++P  +EKQPHQGIS YGREAP G+H      
Sbjct: 359 NAGGGPGYG-NPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSNSQ 417

Query: 407 XXXXXXXXXXXQMQIPLSYPDAVIGTAGSNISYIRRASGATVTVQETRGVPGEMTVEVNG 228
                      QMQIPLSY DAVIGTAG++ISYIRRASGATVT+QETRGVPGEMTVE++G
Sbjct: 418 AAPSMITQITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISG 477

Query: 227 TALQVQTAQQLIQNFMXXXXXXXXXXPQTQTSSYMEQGYNPYATHGSMYASPPN 66
           TA QVQTAQQLIQNFM           Q QT    +QGYNPYA HGS+YASPP+
Sbjct: 478 TASQVQTAQQLIQNFM----AEAGAPTQAQTGGSTDQGYNPYAAHGSVYASPPS 527


>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  212 bits (539), Expect = 6e-53
 Identities = 116/194 (59%), Positives = 129/194 (66%), Gaps = 2/194 (1%)
 Frame = -1

Query: 584 NAAVGPGYGASPHFMPAPRQIDSYFPPAEMPKQLEKQPHQGISTYGREAP-GMHAXXXXX 408
           NA+ GPG+G +P +MP PRQ+DSY+PP E+P  +EKQPHQGIS YGRE P G HA     
Sbjct: 321 NASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQ 380

Query: 407 XXXXXXXXXXXQMQIPLSYPDAVIGTAGSNISYIRRASGATVTVQETRGVPGEMTVEVNG 228
                      QMQIPLSY DAVIGTAG++ISYIRRASGATVT+QETRGVPGEMTVE+NG
Sbjct: 381 PAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEING 440

Query: 227 TALQVQTAQQLIQNFMXXXXXXXXXXPQTQTSSYMEQGYNPYATHGSMYASP-PNXXXXX 51
           TA QVQ AQQLIQNFM           Q Q     +QGYN YA HGSMYASP  N     
Sbjct: 441 TASQVQAAQQLIQNFM----AEAAAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHAS 496

Query: 50  XXXXXXXXXGANYG 9
                    GANYG
Sbjct: 497 HTGGYGPVYGANYG 510


>ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
          Length = 442

 Score =  212 bits (539), Expect = 6e-53
 Identities = 116/194 (59%), Positives = 129/194 (66%), Gaps = 2/194 (1%)
 Frame = -1

Query: 584 NAAVGPGYGASPHFMPAPRQIDSYFPPAEMPKQLEKQPHQGISTYGREAP-GMHAXXXXX 408
           NA+ GPG+G +P +MP PRQ+DSY+PP E+P  +EKQPHQGIS YGRE P G HA     
Sbjct: 252 NASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQ 311

Query: 407 XXXXXXXXXXXQMQIPLSYPDAVIGTAGSNISYIRRASGATVTVQETRGVPGEMTVEVNG 228
                      QMQIPLSY DAVIGTAG++ISYIRRASGATVT+QETRGVPGEMTVE+NG
Sbjct: 312 PAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEING 371

Query: 227 TALQVQTAQQLIQNFMXXXXXXXXXXPQTQTSSYMEQGYNPYATHGSMYASP-PNXXXXX 51
           TA QVQ AQQLIQNFM           Q Q     +QGYN YA HGSMYASP  N     
Sbjct: 372 TASQVQAAQQLIQNFM----AEAAAPAQAQAGGSADQGYNSYAAHGSMYASPASNPAHAS 427

Query: 50  XXXXXXXXXGANYG 9
                    GANYG
Sbjct: 428 HTGGYGPVYGANYG 441


>ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|222857463|gb|EEE95010.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  210 bits (535), Expect = 2e-52
 Identities = 116/194 (59%), Positives = 131/194 (67%), Gaps = 2/194 (1%)
 Frame = -1

Query: 584 NAAVGPGYGASPHFMPAPRQIDSYFPPAEMPKQLEKQPHQGISTYGREAP-GMHAXXXXX 408
           N   GPGYG +P +MP PRQ+D+Y+PPA+MP  +EKQPHQGIS YGREAP G HA     
Sbjct: 203 NHGGGPGYGQNPQYMPPPRQLDNYYPPADMPPLMEKQPHQGISAYGREAPMGSHASSNAQ 262

Query: 407 XXXXXXXXXXXQMQIPLSYPDAVIGTAGSNISYIRRASGATVTVQETRGVPGEMTVEVNG 228
                      QMQIPLSY DAVIGTAG++ISYIRRASGATVT+QETRGVPG MTVE++G
Sbjct: 263 AAPSMITQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGAMTVEISG 322

Query: 227 TALQVQTAQQLIQNFMXXXXXXXXXXPQTQTSSYMEQGYNPYATHGSMYASPP-NXXXXX 51
           TA QVQTAQQLIQNFM           Q QT    +QGYNPY +H S+YASPP N     
Sbjct: 323 TASQVQTAQQLIQNFM----AEAGAPAQPQTGGAADQGYNPY-SHSSVYASPPSNPEHTG 377

Query: 50  XXXXXXXXXGANYG 9
                    GANYG
Sbjct: 378 HAGGYGSMYGANYG 391


>emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
          Length = 534

 Score =  203 bits (516), Expect = 3e-50
 Identities = 116/206 (56%), Positives = 129/206 (62%), Gaps = 14/206 (6%)
 Frame = -1

Query: 584 NAAVGPGYGASPHFMPAPRQIDSYFPPAEMPKQLEKQPHQGISTYGREAP-GMHAXXXXX 408
           NA+ GPG+G +P +MP PRQ+DSY+PP E+P  +EKQPHQGIS YGRE P G HA     
Sbjct: 332 NASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQ 391

Query: 407 XXXXXXXXXXXQMQIPLSYPDAVIGTAGSNISYIRRASGATVTVQETRGVPGEMTVEVNG 228
                      QMQIPLSY DAVIGTAG++ISYIRRASGATVT+QETRGVPGEMTVE+NG
Sbjct: 392 PAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEING 451

Query: 227 TALQVQTAQQLIQ------------NFMXXXXXXXXXXPQTQTSSYMEQGYNPYATHGSM 84
           TA QVQ AQQLIQ            NFM           Q Q     +QGYN YA HGSM
Sbjct: 452 TASQVQAAQQLIQALFLPVFDTKLLNFM----AEAAAPAQAQAGGSADQGYNSYAAHGSM 507

Query: 83  YASP-PNXXXXXXXXXXXXXXGANYG 9
           YASP  N              GANYG
Sbjct: 508 YASPASNPAHASHTGGYGPVYGANYG 533


Top