BLASTX nr result

ID: Atractylodes21_contig00043385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043385
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   123   1e-26
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   123   1e-26
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   118   4e-25
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   118   4e-25
dbj|BAG72154.1| hypothetical protein [Lotus japonicus]                118   6e-25

>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/110 (50%), Positives = 78/110 (70%)
 Frame = +3

Query: 3    RIREDLQQQKTEHKGFDLRQDLLFYKDRLVLPRSSTMIPLLLEEFHSSPLGGHAGEDRTY 182
            ++RE++Q  K    GF   Q +L +K RLV+PR   M   L+ E+H++P+GGH+G  +TY
Sbjct: 902  KLREEVQSGKAPLAGFTEEQGVLKFKGRLVVPRKVAMTSRLIHEYHATPMGGHSGIFKTY 961

Query: 183  QRIASEVFWVGMRKDVVDFVKRCEVCQPNKALSGSPAGLLQPLPIPMQVW 332
            QR+A+E FW GM++DV+ F++ C VCQ NK  S +PAGLLQPLPIP  +W
Sbjct: 962  QRLATEWFWKGMKQDVITFIQECAVCQQNKTSSLAPAGLLQPLPIPTLIW 1011


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/110 (50%), Positives = 78/110 (70%)
 Frame = +3

Query: 3    RIREDLQQQKTEHKGFDLRQDLLFYKDRLVLPRSSTMIPLLLEEFHSSPLGGHAGEDRTY 182
            +I  DLQ+  +   G+ L+Q +L Y+ RLV+   S MIP LL EFHS+P GGH+G  RTY
Sbjct: 825  KIIGDLQRDASSRPGYMLKQGVLLYEGRLVVSSKSVMIPTLLAEFHSTPQGGHSGFYRTY 884

Query: 183  QRIASEVFWVGMRKDVVDFVKRCEVCQPNKALSGSPAGLLQPLPIPMQVW 332
            +R+A+ V+WVGM+  V ++V+ C+ CQ  K L+ SP GLLQPLP+P ++W
Sbjct: 885  RRLAANVYWVGMKNTVQEYVRSCDTCQRQKYLASSPGGLLQPLPVPDRIW 934


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/109 (48%), Positives = 77/109 (70%)
 Frame = +3

Query: 6    IREDLQQQKTEHKGFDLRQDLLFYKDRLVLPRSSTMIPLLLEEFHSSPLGGHAGEDRTYQ 185
            I E L +       + ++Q  LFYK RLVLP++S+++P +L  FH   +GGH+G+ RTY+
Sbjct: 827  IFEQLLKDPDSIPRYSIKQGRLFYKGRLVLPKTSSLLPTILHTFHDLVVGGHSGQLRTYK 886

Query: 186  RIASEVFWVGMRKDVVDFVKRCEVCQPNKALSGSPAGLLQPLPIPMQVW 332
            RIA+E++W GM+ D+  +V +C VCQ NK  + SPAGLLQPLPIP ++W
Sbjct: 887  RIAAELYWEGMKNDIKIYVDQCPVCQQNKTQALSPAGLLQPLPIPSRIW 935


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/110 (48%), Positives = 78/110 (70%)
 Frame = +3

Query: 3    RIREDLQQQKTEHKGFDLRQDLLFYKDRLVLPRSSTMIPLLLEEFHSSPLGGHAGEDRTY 182
            +I++ L      +  + L   +L YK RLVLP++S ++P LL+E H+S +GGH+G   TY
Sbjct: 1681 KIKQRLLXDPDAYPRYSLDHGILLYKGRLVLPKASPLVPALLQEGHASVVGGHSGFLXTY 1740

Query: 183  QRIASEVFWVGMRKDVVDFVKRCEVCQPNKALSGSPAGLLQPLPIPMQVW 332
            +R+  + FWVGM+ D+ +FV++C VCQ NK L+ SPAGLLQPLPIP ++W
Sbjct: 1741 KRLTRDFFWVGMKNDIKEFVEKCLVCQQNKTLTLSPAGLLQPLPIPDKIW 1790


>dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/110 (49%), Positives = 78/110 (70%)
 Frame = +3

Query: 3    RIREDLQQQKTEHKGFDLRQDLLFYKDRLVLPRSSTMIPLLLEEFHSSPLGGHAGEDRTY 182
            ++ ++L  Q     G+ L++  L YKDR+VLP+ ST I  +L+EFH + LGGHAG  RTY
Sbjct: 1064 KVLQELATQGNSAVGYQLKRGRLLYKDRIVLPKGSTKILTVLKEFHDTALGGHAGIFRTY 1123

Query: 183  QRIASEVFWVGMRKDVVDFVKRCEVCQPNKALSGSPAGLLQPLPIPMQVW 332
            +RI++  +W GM+ D+ ++V++CEVCQ NK  + +PAG LQPLPIP Q W
Sbjct: 1124 KRISALFYWEGMKLDIQNYVQKCEVCQRNKYEALNPAGFLQPLPIPSQGW 1173


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