BLASTX nr result

ID: Atractylodes21_contig00043366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043366
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    81   5e-20
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...    92   1e-19
ref|XP_004160859.1| PREDICTED: uncharacterized protein LOC101228...    87   7e-19
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...    87   4e-18
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    86   1e-17

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 80.9 bits (198), Expect(2) = 5e-20
 Identities = 36/70 (51%), Positives = 52/70 (74%)
 Frame = +2

Query: 2    QADQHRTDVQFEVGDWVFLKLRPYRQKTLQQQRHPKLAAKFYGPFEVLTRVGKVAYKLKL 181
            Q D+HR  V FE G  V+LK++PYR ++L ++R+ KLA +FYGPF VL R+G+VAY+L+L
Sbjct: 1374 QEDKHRRAVHFEPGAMVYLKIQPYRHQSLAKKRNEKLAPRFYGPFSVLKRIGQVAYQLQL 1433

Query: 182  PETTRIHQCF 211
            P   ++H  F
Sbjct: 1434 PLGAKLHPVF 1443



 Score = 41.6 bits (96), Expect(2) = 5e-20
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +1

Query: 202  PVFHVSQLRRAIGDCMSSGDIPPQLNDD 285
            PVFH+SQL++A+G   SS  IPPQL +D
Sbjct: 1441 PVFHISQLKKAVGSLQSSPTIPPQLTND 1468


>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score = 91.7 bits (226), Expect(2) = 1e-19
 Identities = 39/69 (56%), Positives = 55/69 (79%)
 Frame = +2

Query: 5    ADQHRTDVQFEVGDWVFLKLRPYRQKTLQQQRHPKLAAKFYGPFEVLTRVGKVAYKLKLP 184
            AD+HR ++ F VGDWV+LKL+P+RQ T+ ++   KLAAK++GP+E+  R+GKVAY+LKLP
Sbjct: 2543 ADKHRRELSFAVGDWVYLKLKPFRQHTVVRRYCQKLAAKYFGPYEISERIGKVAYRLKLP 2602

Query: 185  ETTRIHQCF 211
            +  RIH  F
Sbjct: 2603 DEARIHPVF 2611



 Score = 29.3 bits (64), Expect(2) = 1e-19
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 202  PVFHVSQLRRAIGDCMSSGDIPPQLND 282
            PVFH+SQL+ A+G       IPP  +D
Sbjct: 2609 PVFHISQLKAALGHGQFVQAIPPVCSD 2635


>ref|XP_004160859.1| PREDICTED: uncharacterized protein LOC101228347 [Cucumis sativus]
          Length = 145

 Score = 86.7 bits (213), Expect(2) = 7e-19
 Identities = 38/69 (55%), Positives = 54/69 (78%)
 Frame = +2

Query: 5   ADQHRTDVQFEVGDWVFLKLRPYRQKTLQQQRHPKLAAKFYGPFEVLTRVGKVAYKLKLP 184
           AD  R D++F VGD VFLKLRPYRQ +L+++R+ KL+ K++GP++++ ++G VAYKLKLP
Sbjct: 57  ADLKRRDMEFGVGDLVFLKLRPYRQTSLRKKRNEKLSPKYFGPYKIIEKIGAVAYKLKLP 116

Query: 185 ETTRIHQCF 211
            T  IH  F
Sbjct: 117 STAAIHPIF 125



 Score = 32.0 bits (71), Expect(2) = 7e-19
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 202 PVFHVSQLRRAIGDCMSSGDIPP 270
           P+FHVSQL++A+GD M    I P
Sbjct: 123 PIFHVSQLKKAVGDHMQVHQIVP 145


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score = 87.4 bits (215), Expect(2) = 4e-18
 Identities = 37/69 (53%), Positives = 55/69 (79%)
 Frame = +2

Query: 5    ADQHRTDVQFEVGDWVFLKLRPYRQKTLQQQRHPKLAAKFYGPFEVLTRVGKVAYKLKLP 184
            AD+ R DV FE+ +WV+LKLRPYRQ ++  +++ KL+ +++GPF+VL R+G+VAYKL+LP
Sbjct: 1468 ADKSRRDVAFEIDEWVYLKLRPYRQSSVAHRKNEKLSQRYFGPFKVLHRIGQVAYKLQLP 1527

Query: 185  ETTRIHQCF 211
            E + IH  F
Sbjct: 1528 EHSTIHPVF 1536



 Score = 28.5 bits (62), Expect(2) = 4e-18
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +1

Query: 202  PVFHVSQLRRAIGDCMSSGDIPPQLN 279
            PVFHVSQL+RA+    +  ++P  L+
Sbjct: 1534 PVFHVSQLKRAVPPSFTPQELPKILS 1559


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 85.9 bits (211), Expect(2) = 1e-17
 Identities = 39/69 (56%), Positives = 54/69 (78%)
 Frame = +2

Query: 5    ADQHRTDVQFEVGDWVFLKLRPYRQKTLQQQRHPKLAAKFYGPFEVLTRVGKVAYKLKLP 184
            AD  RT+V+F+VGD VFL+L+PYRQ++L ++   KLA +FYGPF VL R+G  AYKL+LP
Sbjct: 1442 ADGSRTEVEFQVGDAVFLRLQPYRQRSLAKRPFEKLAPRFYGPFTVLQRIGATAYKLQLP 1501

Query: 185  ETTRIHQCF 211
             +++IH  F
Sbjct: 1502 PSSKIHPVF 1510



 Score = 28.9 bits (63), Expect(2) = 1e-17
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 202  PVFHVSQLRRAIGDCMSSGDIPPQLNDD 285
            PVFHVS L++ +G+      IPP ++ D
Sbjct: 1508 PVFHVSLLKKVVGNTPVLPTIPPHIDVD 1535


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