BLASTX nr result

ID: Atractylodes21_contig00043317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043317
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ...   137   9e-31
ref|XP_002297869.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_002304648.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   134   1e-29
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              134   1e-29

>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
            gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
            phosphatase, putative [Ricinus communis]
          Length = 1195

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/69 (94%), Positives = 68/69 (98%)
 Frame = -2

Query: 207  DADVRNILASEQREILGGCRIVFSRVFPVGEASPHLHPLWQTAEQFGAVCTNQIDEQVTH 28
            +ADVRNILASEQR+IL GCRIVFSRVFPVGEA+PHLHPLWQTAEQFGAVCTNQIDEQVTH
Sbjct: 1090 EADVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEQVTH 1149

Query: 27   VVANSLGTD 1
            VVANSLGTD
Sbjct: 1150 VVANSLGTD 1158


>ref|XP_002297869.1| predicted protein [Populus trichocarpa] gi|222845127|gb|EEE82674.1|
            predicted protein [Populus trichocarpa]
          Length = 1117

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/69 (91%), Positives = 67/69 (97%)
 Frame = -2

Query: 207  DADVRNILASEQREILGGCRIVFSRVFPVGEASPHLHPLWQTAEQFGAVCTNQIDEQVTH 28
            +ADVRNILASEQR+ILGGCRI+FSRVFPVGE +PHLHPLWQ AEQFGAVCTNQIDEQVTH
Sbjct: 1012 EADVRNILASEQRKILGGCRILFSRVFPVGEVNPHLHPLWQMAEQFGAVCTNQIDEQVTH 1071

Query: 27   VVANSLGTD 1
            VVANSLGTD
Sbjct: 1072 VVANSLGTD 1080


>ref|XP_002304648.1| predicted protein [Populus trichocarpa] gi|222842080|gb|EEE79627.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/69 (91%), Positives = 67/69 (97%)
 Frame = -2

Query: 207 DADVRNILASEQREILGGCRIVFSRVFPVGEASPHLHPLWQTAEQFGAVCTNQIDEQVTH 28
           +ADVRNILASEQR+IL GCRIVFSRVFPVGE +PHLHPLWQ+AEQFGAVCTNQIDEQVTH
Sbjct: 133 EADVRNILASEQRKILAGCRIVFSRVFPVGEVNPHLHPLWQSAEQFGAVCTNQIDEQVTH 192

Query: 27  VVANSLGTD 1
           VVANSLGTD
Sbjct: 193 VVANSLGTD 201


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/69 (91%), Positives = 66/69 (95%)
 Frame = -2

Query: 207  DADVRNILASEQREILGGCRIVFSRVFPVGEASPHLHPLWQTAEQFGAVCTNQIDEQVTH 28
            + DVRNILASEQR+IL GCRIVFSRVFPVGEA+PHLHPLWQTAE FGAVCTNQIDEQVTH
Sbjct: 1133 EVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTH 1192

Query: 27   VVANSLGTD 1
            VVANSLGTD
Sbjct: 1193 VVANSLGTD 1201


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/69 (91%), Positives = 66/69 (95%)
 Frame = -2

Query: 207  DADVRNILASEQREILGGCRIVFSRVFPVGEASPHLHPLWQTAEQFGAVCTNQIDEQVTH 28
            + DVRNILASEQR+IL GCRIVFSRVFPVGEA+PHLHPLWQTAE FGAVCTNQIDEQVTH
Sbjct: 1079 EVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTH 1138

Query: 27   VVANSLGTD 1
            VVANSLGTD
Sbjct: 1139 VVANSLGTD 1147


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