BLASTX nr result

ID: Atractylodes21_contig00043311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043311
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140406.1| PREDICTED: uncharacterized protein LOC101221...    90   2e-16
ref|XP_002518806.1| virion binding protein, putative [Ricinus co...    90   2e-16
ref|XP_003631343.1| PREDICTED: uncharacterized protein LOC100266...    87   1e-15
ref|XP_002275179.1| PREDICTED: uncharacterized protein LOC100266...    87   1e-15
emb|CAR82363.1| TOM3 protein [Nicotiana benthamiana]                   87   1e-15

>ref|XP_004140406.1| PREDICTED: uncharacterized protein LOC101221380 [Cucumis sativus]
           gi|449498371|ref|XP_004160520.1| PREDICTED:
           uncharacterized protein LOC101224176 [Cucumis sativus]
          Length = 292

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/70 (62%), Positives = 51/70 (72%)
 Frame = +2

Query: 212 MGRALLGRYNDAVVMYVLKDAYDWWDEFNHSHVLQDWIFHVLAALYGIVTLVALVQLIRI 391
           M  + LG  N  V  ++L DA  WW E N+SH+ QD IF  LAALYG+V +VALVQLIRI
Sbjct: 1   METSSLGIDNSGVPAFLLTDATSWWQEINYSHLWQDRIFFTLAALYGLVGIVALVQLIRI 60

Query: 392 QLRVPEYGWT 421
           QLRVPEYGWT
Sbjct: 61  QLRVPEYGWT 70


>ref|XP_002518806.1| virion binding protein, putative [Ricinus communis]
           gi|223542187|gb|EEF43731.1| virion binding protein,
           putative [Ricinus communis]
          Length = 292

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/59 (67%), Positives = 50/59 (84%)
 Frame = +2

Query: 245 AVVMYVLKDAYDWWDEFNHSHVLQDWIFHVLAALYGIVTLVALVQLIRIQLRVPEYGWT 421
           AV+ + L++A +WW++ NHS + QD IFHVLAALYG+V  VALVQL+RIQLRVPEYGWT
Sbjct: 12  AVIAFKLRNASNWWEDINHSVMWQDRIFHVLAALYGLVAAVALVQLVRIQLRVPEYGWT 70


>ref|XP_003631343.1| PREDICTED: uncharacterized protein LOC100266794 isoform 2 [Vitis
           vinifera]
          Length = 264

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/59 (71%), Positives = 46/59 (77%)
 Frame = +2

Query: 245 AVVMYVLKDAYDWWDEFNHSHVLQDWIFHVLAALYGIVTLVALVQLIRIQLRVPEYGWT 421
           AV  Y +  A +WW+E N S V QD IFHVLAALYGIV  VALVQL+RIQLRVPEYGWT
Sbjct: 10  AVSAYAITQASNWWEEVNRSIVWQDRIFHVLAALYGIVAAVALVQLVRIQLRVPEYGWT 68


>ref|XP_002275179.1| PREDICTED: uncharacterized protein LOC100266794 isoform 1 [Vitis
           vinifera] gi|297738282|emb|CBI27483.3| unnamed protein
           product [Vitis vinifera]
          Length = 290

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/59 (71%), Positives = 46/59 (77%)
 Frame = +2

Query: 245 AVVMYVLKDAYDWWDEFNHSHVLQDWIFHVLAALYGIVTLVALVQLIRIQLRVPEYGWT 421
           AV  Y +  A +WW+E N S V QD IFHVLAALYGIV  VALVQL+RIQLRVPEYGWT
Sbjct: 10  AVSAYAITQASNWWEEVNRSIVWQDRIFHVLAALYGIVAAVALVQLVRIQLRVPEYGWT 68


>emb|CAR82363.1| TOM3 protein [Nicotiana benthamiana]
          Length = 128

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/72 (61%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = +2

Query: 212 MGRA--LLGRYNDAVVMYVLKDAYDWWDEFNHSHVLQDWIFHVLAALYGIVTLVALVQLI 385
           MGRA  ++G    AV  ++  +A  WW+E N S   QD IFHVLA LYGIV+ VALVQLI
Sbjct: 1   MGRADMVVGPSAAAVAYHLKNEAISWWEELNRSRAWQDRIFHVLAILYGIVSAVALVQLI 60

Query: 386 RIQLRVPEYGWT 421
           RIQ+RVPEYGWT
Sbjct: 61  RIQMRVPEYGWT 72


Top