BLASTX nr result

ID: Atractylodes21_contig00043266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043266
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309782.1| GRAS family transcription factor [Populus tr...   131   6e-29
ref|XP_002327997.1| GRAS family transcription factor [Populus tr...   130   1e-28
ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifer...   128   5e-28
emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]   127   9e-28
ref|XP_003543573.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...   115   3e-24

>ref|XP_002309782.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222852685|gb|EEE90232.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 411

 Score =  131 bits (329), Expect = 6e-29
 Identities = 62/87 (71%), Positives = 72/87 (82%)
 Frame = -1

Query: 275 LSCDDKQNIGSGDCERREKGNQWRERLKELFSPVGFSDDVVDDVKALLRRYRTGWSLALD 96
           L+CD+  +   G+CERRE+G+QW ERL+E FSPVGFSDDVVDDVKALL+RYR GW+L L 
Sbjct: 329 LACDEGND--GGECERRERGSQWFERLREAFSPVGFSDDVVDDVKALLKRYRAGWALVLP 386

Query: 95  QTNSKTDSGIYLAWKEEPVVWASAWKP 15
           Q +   DSGIYL WKEEPVVWASAWKP
Sbjct: 387 QGDH--DSGIYLTWKEEPVVWASAWKP 411


>ref|XP_002327997.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222837406|gb|EEE75785.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 411

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/87 (70%), Positives = 72/87 (82%)
 Frame = -1

Query: 275 LSCDDKQNIGSGDCERREKGNQWRERLKELFSPVGFSDDVVDDVKALLRRYRTGWSLALD 96
           L+CD++   G G+CERRE+G QW ERL+E FSPVGFSDDVVDDVKALL+RY+ GW+L L 
Sbjct: 329 LACDEET--GGGECERRERGVQWSERLREAFSPVGFSDDVVDDVKALLKRYKAGWALVLP 386

Query: 95  QTNSKTDSGIYLAWKEEPVVWASAWKP 15
           Q +   +SGIYL WKEEPVVWASAWKP
Sbjct: 387 QGDH--ESGIYLTWKEEPVVWASAWKP 411


>ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifera]
           gi|296081342|emb|CBI17688.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score =  128 bits (321), Expect = 5e-28
 Identities = 58/87 (66%), Positives = 68/87 (78%)
 Frame = -1

Query: 275 LSCDDKQNIGSGDCERREKGNQWRERLKELFSPVGFSDDVVDDVKALLRRYRTGWSLALD 96
           L+CDD ++    DCERREKG QW E LKE+FSP+GFS+DVVDDVKALL+RYR+GW+L   
Sbjct: 350 LACDDIEDDTGEDCERREKGIQWSEGLKEVFSPLGFSEDVVDDVKALLKRYRSGWALVPP 409

Query: 95  QTNSKTDSGIYLAWKEEPVVWASAWKP 15
           Q       GIYL WK+EPVVWASAWKP
Sbjct: 410 QQGENHQLGIYLTWKDEPVVWASAWKP 436


>emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]
          Length = 436

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/87 (66%), Positives = 67/87 (77%)
 Frame = -1

Query: 275 LSCDDKQNIGSGDCERREKGNQWRERLKELFSPVGFSDDVVDDVKALLRRYRTGWSLALD 96
           L+CDD ++    DCERREKG QW E LKE FSP+GFS+DVVDDVKALL+RYR+GW+L   
Sbjct: 350 LACDDIEDDTGEDCERREKGIQWSEGLKEXFSPLGFSEDVVDDVKALLKRYRSGWALVPP 409

Query: 95  QTNSKTDSGIYLAWKEEPVVWASAWKP 15
           Q       GIYL WK+EPVVWASAWKP
Sbjct: 410 QQGENHQLGIYLTWKDEPVVWASAWKP 436


>ref|XP_003543573.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 443

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/74 (72%), Positives = 61/74 (82%)
 Frame = -1

Query: 236 CERREKGNQWRERLKELFSPVGFSDDVVDDVKALLRRYRTGWSLALDQTNSKTDSGIYLA 57
           CERRE+G QW ERL+  FSP GFSDDVVDDVKALL+RY++GWSL + Q +    SGIYL 
Sbjct: 371 CERRERGIQWCERLRNAFSPSGFSDDVVDDVKALLKRYQSGWSLVVTQGDEHI-SGIYLT 429

Query: 56  WKEEPVVWASAWKP 15
           WKEEPVVWASAWKP
Sbjct: 430 WKEEPVVWASAWKP 443


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